Transcript Dmel\oc-RB

General Information
Symbol	Dmel\oc-RB	Species	D. melanogaster
Annotation Symbol	CG12154-RB	FlyBase ID	FBtr0100341
Feature type	mRNA	Associated gene	Dmel\oc
Created / Updated	2005-10-08/2005-10-08

Evidence Rank	Strongly Supported	Length (nt)	3737
Evidence Score	11

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 13 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	RE10280
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	EK190660 EC054172 EP06406 EK068232 EC054681 EP21336
End(s) extend beyond the annotated transcript, internally consistent	EK211139 EK217541 EK154824 EK042809 RE67026 RE45526
Sequence
	GGGTTGTTTTTGTGCGTCGTCCGTCGCCCAGTTGCTCAGTTGCTCATTCG CCCCGTTCGCCGCTCGTTCGATCGCTCTCGCCACTCGCCGCGTTCGCCGA TAAGCAAGCAAGCACCAGCGCAAGCCAATAACAACAATCAATTCGCCGTC GCCAAACCGAATCAAATCAAATCGAAGCAAACTAAACCAATCAAACACAA ATAAACAAATATCAACACGAGAAGCTATAGCTAACACAGCTATAGAGAAA CAAAGAGCCCCAGAGGAGAATACTAAGTAATACAGAGAGATATATCCTTT TGGATATAACGCAGTGCCAAGTGACGAGAATCTGTTTTTTTACCGTGTTG CCAGTGCTAAACCATAAACATCGCCCAAAAAACATACATCTCTGGAATAC AATATTTATATATATATAAATATACATATATATCTTTATATATATGCATG TGTAAAATATACTCATGCCATAACCATATAGTAGTTGGATCCGAAAACAA GTCACCATTGGAATACAGCACCGTTTTGCTTCTAGTTTTGTTTGTGTTTT TTTTTCGATCCTACTGAAAGGACCTAGAGCGCACTAACCAGCGATTATCG CTCTACTTGACTATCGATCGGAATACGTGAGTGACCTGGTGGATAGATCC AGCCAGTTCCAGCTCCAGCTCCAGCTTCAGCTACAGATACAGATACGGAT ACGGATACGGATTATAGAAGCCTGAGGCCAGTGGAGACACACAGCTTCAA CGTGGCGCTGCACTCGACCGAGGCCTTAATGGCGGCGGGCTTCCTCAAAT CGGGCGATTTGGGCCCCCATCCGCACAGTTACGGGGGTCCGCATCCGCAT CATTCGGTGCCGCACGGACCCCTGCCGCCCGGCATGCCCATGCCATCGCT GGGGCCCTTCGGCCTCCCACACGGACTGGAGGCCGTCGGGTTCTCCCAAG GTATGTGGGGCGTCAACACACGAAAACAGCGTCGCGAACGCACCACATTC ACACGCGCCCAATTGGATGTTCTGGAAGCGCTATTTGGCAAGACCCGTTA TCCGGACATATTCATGCGCGAAGAAGTGGCGCTCAAGATCAATCTGCCCG AATCTAGAGTACAGGTGTGGTTCAAGAATCGCCGCGCCAAGTGCCGCCAA CAGTTGCAGCAGCAGCAGCAGTCGAATAGCTTGAGCAGCTCGAAGAATGC CAGCGGTGGCGGCAGCGGCAACAGCTGCAGCAGCTCCTCGGCCAACAGTC GCAGCAATAGCAATAATAACGGCAGCAGCAGCAACAACAACACACAGAGC TCCGGCGGCAATAACAGCAACAAGTCGTCGCAAAAGCAGGGCAACTCACA GTCCAGCCAGCAGGGCGGTGGCTCCTCCGGTGGCAATAATAGCAACAACA ATTCGGCAGCAGCGGCAGCCAGTGCAGCGGCAGCGGTGGCAGCGGCCCAA TCGATTAAGACGCACCACAGTTCCTTTTTGAGCGCCGCAGCGGCGGCAGC ATCGGGCGGTACAAATCAGTCGGCCAACAATAATAGCAACAACAACAACC AAGGCAACTCAACGCCGAACAGCAGCAGCAGCGGCGGCGGCGGCGGTAGC CAAGCGGGCGGACACCTATCCGCGGCAGCAGCAGCGGCTGCCCTAAACGT GACCGCCGCCCATCAGAACTCCTCGCCACTGCTGCCCACGCCGGCCACGT CCGTCAGTCCGGTGAGCATCGTTTGCAAAAAGGAGCACTTGTCCGGCGGC TATGGATCCAGTGTGGGTGGCGGCGGCGGCGGCGGTGGCGCCTCATCCGG CGGCCTCAATTTGGGCGTCGGCGTCGGCGTTGGCGTTGGCGTCGGTGTGG GCGTATCGCAGGATCTGCTTCGCTCGCCCTATGATCAGCTAAAGGATGCC GGTGGTGATATTGGTGCCGGAGTGCATCATCATCACAGCATCTATGGCTC GGCCGCCGGCAGCAATCCGCGCCTGCTGCAGCCGGGTGGCAATATCACAC CGATGGACAGCAGCAGCAGCATCACCACACCATCGCCGCCCATTACACCC ATGTCGCCGCAATCGGCGGCCGCAGCGGCCCATGCCGCCCAATCGGCCCA GTCCGCCCACCATTCTGCCGCCCATTCGGCCGCCTATATGTCCAATCATG ATTCGTATAACTTCTGGCACAATCAGTACCAGCAATATCCGAATAACTAT GCCCAGGCGCCCAGCTACTACTCACAGATGGAGTACTTTAGCAATCAGAA TCAGGTCAACTACAACATGGGCCATTCGGGCTACACGGCCTCCAATTTTG GTCTGTCGCCATCGCCATCCTTCACGGGCACCGTGTCCGCGCAGGCCTTC TCCCAGAACAGCCTGGATTACATGTCGCCGCAGGATAAGTACGCGAATAT GGTGTAGAATCTACTCTTCCAATACTGCAGCGGTGGCAGCAACAACAACA GTTCAGCGGGGGCAAGTGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGT TCGGGTTCGGGTTCTGGTTGTGGATCTGGTTCTGGTTCTGGTTCTGGTTC TGGATCGGGGAGCAATAGTTCTCCCCAGCTGGAGCAGCACCATCATCAGC AGCACCAGCACCAGCTACAGCAGCATCAGCATCACCAGAATCATCACCAG AATCAACACCAGAATCACCACGGCCATCATCATCATCAGCAGCAACACCA TCATGATGATGAACAGCGACAGGATATAGGGCATCAAGGAGATCAGCAGC AACTGGATCATACGTTCGGTTAAGATTGATATAGCGAGTATAGAGCCACA TGGATACATATCTACAGCCCACATAGATACAGCCCCCGACACTCCGCTGC ATTCTCAGAACAAATTCGAAGACACACCGACCGTAGATACACTTCCTTTG CGATCGTATTTGTTGGAAATAGGAAATTCAAGTTCTCATTGATTTCGAAA GACTCTTCTTGACTCGTATAAATTCAGAGTGATAGATATATAGATTTCTC ACATTATTGATTGTTAGATTAATTATTAAATTTCATATTGAGGCATTTAG ATTTCAATATCAATATCGTACATGGTTATTTATAGATTCAAGAAAATTCT TTTAAGTCTCAAACTTTCGAACATCCAATTTAGCAATGCCAACTATGATC GCGAAATGGAATGCACCGCGTTGGAGGTCTATTTCCATTCTTTTTTTTTT TTTTTTTGTGTAGTTAACAAGAATTTTTTTTTAAATATATATATATATAT ATGTATTAGAAGCGTGTGTAAAAAGCGGGGGGAGTTACAAGTTTATACAG CCCAAACATAAACGTAAATCTATAACTAAACATAGGTATTATAGGCCTAG CTTAAGCCGCCAGGATCAACGAAGTAAATGAGTGATAAATCAAGGAAAAA AAACCGATGACAAACATTTGTTAAAATCCAGAGAGTAAATGCATGCGAGG ATTGCGAAAAGTGGGGCGTTAATTGTAAGTTGGCAGGAGAGTTTTTAAAT GCAATACGTAGACCATTACGTGGTACAGCCAGGGGGGCGTTGGGTGGCAA TCAACCCAAAAAAAAAAACGTATGGGGACATTTGGGGATCGCCAGTAAGA GGAGAACAGAGCTGCACCACCAACACCACCACCACCATAGAACTGGTGGT TTGGACCAGCTCAGCATATCATAAAGCTAAAACTTAATTCCAATTTCAAG TTCTTTAAACCAAACTAAGACATAACATTATGAAAAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) oc-RA FBtr0089650 3755
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) oc-PB FBpp0099746 665
Derived from OTHER transcripts	Name FlyBase ID Length (aa) oc-PA FBpp0088593 671
Comments
	oc-RB is the major splice form (FBrf0086078). oc-RB is the major splice form (FBrf0086078).
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_001014727
Synonyms
	oc-RB
References ( 3 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]