Transcript Dmel\pan-RB

General Information
Symbol	Dmel\pan-RB	Species	D. melanogaster
Annotation Symbol	CG34403-RB	FlyBase ID	FBtr0089159
Feature type	mRNA	Associated gene	Dmel\pan
Created / Updated	2004-06-05/2004-06-05

Evidence Rank	Strongly Supported	Length (nt)	2988
Evidence Score	15

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 17 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	IP15537
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	EK133323 EK189531 EP08334 EP06936 EK037714 EK063420 EK194835 EK050136 EK220654 EK196248
End(s) extend beyond the annotated transcript, internally consistent	EK021416 EK165711 EK117109 EK108433 EK062439 EK175947
Sequence
	CAACGCAGACGTGGTACGGCGTTTTAAATCTGATAACATTTTGAACCGGG AATTATTTTAGAGTACCATTCTTTGTTTTGTGCCTGTTTCAGTATAAATT AATTATGCGCCTGATTTAAAGTACAAAATGTGTAAATATATCACCTTACC GTCGCGGGTGCACCCAATTGTGCTTTGATGAATAAATATACATATATGCA ACATATATAACTTCCTGTGTTAGTATAAGTGTATGTCAGCCAAAAACAAA TATATATATGAGTGTTTATCGGCATTCGTGTGCTGGCAGAGCAGCGATCA AAGCTGCGTTCGGTACTCGTTGACTGGCCCAAGAATGAATTCTCGTGCAA GTGTGTTGATAAAAAGTATACGTATGTATATATGCCCTTATAGAGTAAAT ACGACCTAACCGTCAAAATCATGCCTCATACACACAGCAGGCATGGATCA TCAGGAGATGATTTATGCAGTACTGATGAAGTGAAGATTTTTAAAGACGA AGGAGATCGCGAGGATGAAAAAATATCATCTGAGAACTTATTAGTTGAAG AAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGAAAAGGGTCACAAA ATTTCAAGGCCGGACCACAGCCCTGTTTTTAATAAGCTGGACACCCACGC CCCTAGCTTTAACATGGGTTACTTAGTTTCTCCTTATTCGTATGCCAATG GTTCTCCAAGTGGCTTACCGGTAACTATGGCCAACAAAATTGGACTGCCT CCGTTTTTTTGTCACAATGCTGATCCGTTATCAACACCACCACCAGCGCA TTGCGGAATTCCTCCATATCAACTGGATCCTAAGATGGGCTTAACTCGAC CAGCGCTATACCCATTTGCGGGAGGTCAATATCCTTACCCAATGCTAAGT TCAGATATGTCTCAAGTGGCATCATGGCACACTCCTTCTGTTTATTCTGC ATCTAGTTTTAGAACTCCTTATCCCTCCTCACTACCAATAAATACTACAC TTGCAAGTGATTTTCCATTCCGTTTTTCACCTAGCCTTTTACCTTCAGTA CATGCCACATCGCACCACGTTATAAATGCTCATTCTGCTATTGTGGGGGT TAGCTCTAAACAAGAATGCGGTGTTCAGGACCCAACAACGAATAATAGAT ATCCAAGGAACCTGGAAGCAAAGCACACATCAAATGCGCAATCAAATGAA TCCAAGGAGACAACAAATGATAAAAAAAAACCCCATATTAAGAAGCCACT AAATGCGTTCATGCTCTATATGAAGGAAATGCGTGCTAAGGTTGTTGCTG AATGCACTCTGAAGGAATCGGCTGCGATTAATCAGATTTTAGGAAGACGG TGGCACGAACTTTCCCGCGAAGAACAAAGCAAATATTACGAAAAAGCTCG ACAAGAGCGCCAATTGCATATGGAATTGTATCCGGGGTGGAGCGCACGAG ATAACTATGGTTACGTGTCAAAAAAGAAAAAGCGAAAAAAAGACAGATCG ACAACGGATTCGGGAGGCAATAATATGAAAAAATGCCGCGCCCGTTTCGG ACTAGATCAACAGAGTCAGTGGTGCAAACCGTGCAGGCGCAAAAAGAAAT GTATTCGTTATATGGAAGCCCTGAACGGCAATGGGCCCGCCGAAGACGGC AGCTGTTTTGATGAGCACGGAAGTCAGCTAAGTGATGACGACGAAGATGA CTACGATGATGATAAACTAGGCGGAAGTTGTGGAAGCGCCGACGAAACCA ATAAAATAGAAGATGAGGACTCGGAATCCCTTAATCAATCTATGCCAAGC CCAGGCTGTCTTAGTGGATTGTCCAGTTTACAGAGCCCATCGACAACAAT GAGCTTGGCAAGCCCACTTAACATGAATGCCAATTCAGCAACCAATGTTA TATTTCCTGCTTCTTCTAATGCACTTTTAATTGTCGGCGCAGACCAGCCG ACAGCACAGCAACGACCCACATTGGTGTCAACCTCGGGATCGAGCAGCGG TTCAACCAGTAGCATAAGTACAACCCCAAATACGTCGAGTACAGTTTCGC CAGTTACATGTATGACCGGTCCGTGTCTCGGTTCATCTCAGGAACGAGCC ATGATGCTTGGAAATCGGTTCAGTCACTTGGGAATGGGGCTAAGTCCACC AGTAGTTAGCACGAGCACCAGTAAATCTGAACCATTTTTTAAGCCTCATC CCACAGTTTGCAATAATCCTATATTTGCATTGCCATCAATTGGTAATTGT AGTTTAAATATTTCTTCAATGCCAAACACATCCCGAAACCCTATTGGTGC TAACCCACGAGATATTAATAATCCCCTTAGCATCAATCAGCTGACTAAAA GACGTGAATATAAAAATGTTGAGTTAATTGAAGCTAGTGAGTCAAAGACT ATAGTTGCCCATGCCGCTACATCCATTATTCAACATGTAGCAGTGAACGG CTATCATGCTAATCACTCGCTTTTAAATAGCAACTTGGGCCACCTTCATC ACCAATTAAATAATCGTACAGAAAACCCGAATAGAAGTGAGCAGACAATG CTGTCCGTAAGTAATCATTCTGTAAATAGCAGTGAATGCCATAAAGAATC TGATTCGCAGGCTATTGTATCTAGCAATCCTCCAAACGCTGGATCTTCCG ATAACGGCGTTATTAGCGTTTCATAACTGATCGCCATGGATTTGTAGAAT TGATTAATCAAATTTTAATGTTAATGTGTGAGAAAATAATTAAAATAAAA ACATAAGTGCAATAATTATTATTCTCGCCAGCCCAAAGCCATCTTATGAA ACAAAAGGCCATCAAAACTAGTGCCACGACTCACATCGCAATATTTCGTT TAATAAAGAAAACATAGAATTGGTGCACAAAAATCTTTTGAAACGACTCC GAGGCCAACCCGAAAGAATAAAGAAACATGAGTCAAATCTCAGGCTAGGC CGTGCCAAATAGAATAAACAGACAATACACACTAAAAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) pan-RA FBtr0089161 2799 pan-RC FBtr0089160 3274 pan-RD FBtr0089162 2839 pan-RE FBtr0089156 2868 pan-RF FBtr0089158 2742 pan-RG FBtr0089157 2800 pan-RH FBtr0100245 2976 pan-RI FBtr0100246 3519 pan-RJ FBtr0112657 3891
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) pan-PB FBpp0088226 751
Derived from OTHER transcripts	Name FlyBase ID Length (aa) pan-PA FBpp0088228 751 pan-PC FBpp0088227 751 pan-PD FBpp0088229 751 pan-PE FBpp0088223 751 pan-PF FBpp0088225 751 pan-PG FBpp0088224 751 pan-PH FBpp0099631 747 pan-PI FBpp0099632 410 pan-PJ FBpp0111569 1192
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_079880
Synonyms
	CG17964-RB pan-RB
References ( 3 )
FlyBase analysis	FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.2 of the annotated D.melanogaster genome. [FBrf0182792] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]