Transcript Dmel\otk-RA

General Information
Symbol	Dmel\otk-RA	Species	D. melanogaster
Annotation Symbol	CG8967-RA	FlyBase ID	FBtr0088028
Feature type	mRNA	Associated gene	Dmel\otk
Created / Updated	2004-06-05/2004-06-05

Evidence Rank	Strongly Supported	Length (nt)	4644
Evidence Score	11

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 8 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent	LP17455
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	LP21473 EC054972 EC053991 EC054489
End(s) extend beyond the annotated transcript, internally consistent	EP21032 EC27129 EK221760
Sequence
	GCGTGCAGTTCAGATTGAGTTTGAGGTTCGATTGGATTCGAGATATCCAA GTTCCTTTTGCGCTACGTTTTGTTTAGCCGAGTTTGCCCCGAACTAAAAT CACCCACCAAAGCCGGTTCGGGATGCGATGATGCCAAGGATGCAGCTGAT GCAGCCGGGCTCTTGTATCTTTAAGATACAAATTAAGTTGATTTGTTGCG CTCGCGTTCTCTTGGGTAATTGAACCCCACAGTTGGGCTCCTTGCGCCCT CTGCCGCGCGGTCTTCGGTCTTCGGTCTTCGAGCATTTCGTTGCATTTTG TGTATCTAGATACCTTTGTCGGTATCCGTATCCGTCGCTTGTCAATCTGG TCGCTGATAAAAAAGCAAACGCGAACGCAGCCACGAAACATAAACCAGCC GTCAACGGAAAATAAAAGTAAAAAGCAACAAACAGCAAGTGGCGTATCAG TTCGTGTGTTCTCGGTGATAAATGCATTTCATGCGTTCCAACTATGTAAA TAGCAATTTAATTTGAGTGTCCACAGTAAACATCAAAAAACCGCCCTGGA CTCCAGTCACCACCACCAACAACACCATCCCCGGTGGAGCCCAGTGATCC CATTGAAACCCCGGTAAACCCCTGAAAAGGGCAGTCGTTGTCATCGTCGT CATCGTCGTCGTCGTCGTACGTCTGTGCCATCCAAATATTGAATATTTAC AAATGCGTTGAGTGCATTTTCGAGTGGCCGGCACTTACAGTGACTATCTG GTGGATGTGCGAGTGTATTCATCGGATTGCCAGCAGCATAAAACTTCGTT TTCGATACTGATCCAATACGCGAGTGCTTATATATTTTTTGTGTCGCTAA TTGAGACCAAAGGTGTCGAAGTGCGGCGGTTATACATATACGCAGATGAC TGCTAGGATGATCTCAATATGCGGCCTGGTCATGGCTTTGATGATGGCTT CCGTTTTGGCCAGCTCATCGCGTTTCCAGCGAGTGCCCCAAAGTCAGTCC GTGGTGGAAAATGAATCCGTGAAATTCGAGTGCGAATCGACCGACTCCTA CAGTGAACTGCACTACGACTGGTTGCATAATGGTCATCGGATTGCGTATG ACAAGCGTGTCCATCAAATCGGTTCCAATTTGCATATCGAGGCGGTGCGG CGCACGGAGGATGTTGGCAACTATGTTTGCATCGCGACAAATTTGGCCAG CGGCGCCAGGGAGGCGTCTCCGCCCGCCAAACTGAGCGTGATATATCTTG AATCGGCCAGTGTTCAGCTGCTGGGCAGCAATCGCAACGAGCTGCTGCTC AAGTGCCACGTGGAGGGCGCCTCAGGAGATTTGGAACCGCTAGAGATCGA ATGGTATCGCAACAGCGAGAAACTTAGCACCTGGAAGAACGTCCAGCTGG ATCAGCATCGCCTGATAATCCGACAGCCGGGAAGCGAGGACGATGGCCTG TACCGCTGCACCGCCTCCAATGCGGCGGGTCGAGTGATGAGCAAGCAGGG CTATGTCTACCAGTCCAGTGTGAAGTGCCTGCCCCGACTTCCTAGGCGCA AGAACGAAAAGATGATGGAGTCCTGGGACAAACAGACCTTCCTGTGCCGC GGTAAGCGCGGTGGAGCTGCTGGACTAGAGGCACTACCCGCCGCTCCCGA GGATCTGCGCATTGTGCAAGGACCCATTGGTCAGTCGATTATCAAGGAGG GTGAGCCCACGGCTTTGACCTGTCTGTATGAACTGCCCGACGAGCTGAAG AACCAGCGCATTCAACTCCGTTGGCGCAAAGATGGCAAACTTTTGCGTCA AGTGGAACTGGGTGGCTCGGCGCCCATTCCAGGTCACTCCTTCGATTCCG GCAAGGATGCTCTGTTGCGTGAGGACGCCCGTCTAGTGCTGCACAAGCAG AATGGCACCCTAAGCTTTGCCAGCATTATTGCCAGTGATGCGGGTCAGTA CCAGTGTCAGTTGCAGCTAGAAGCTCATGCTCCGATTAACTCATCTCCTG GCATCTTGGAGGTCATCGAGCAGCTAAAGTTTGTTCCTCAGCCCACGTCC AAGAATTTGGAGCTGGATGCAGTGGTGGCCAAGGTTCACTGCAAGGCGCA GGGCACTCCAACGCCGCAGGTGCAATGGGTTAGGGATGGGGAAAATACCA CTTTACCCGACCATGTAGAAGTGGATGCCAATGGAACACTGATTTTCAGA AACGTTAACTCGGAACATCGCGGCAACTACACTTGCTTGGCCACCAACAG CCAAGGACAGATAAATGCCACTGTGGCTATAAATGTGGTGGTCACTCCCA AATTTAGTGTGCCCCCAGTGGGACCCATCGAGACTTCGGAGCAGGGCACC GTGGTGATGCATTGCCAGGCGATTGGGGACCCCAAGCCGACAATTCAGTG GGACAAGGATCTAAAGTATCTGAGTGAGAACAATACGGACCGCGAAAGAT TTAGGTTCCTGGAGAACGGCACTCTGGAGATACGGAATGTCCAGGTGGAG GACGAGGGTAGCTACGGCTGCACAATTGGAAATAGTGCAGGACTCAAGCG AGAGGATGTCCAGTTGGTAGTGAAGACAACCGGTGACGGTTTCGCTCCAG AGGAATCCGGAGGTGATGGCTTCCTGGTCACCCGAGCTGTACTGATCACC ATGACGGTGGCCCTGGCCTACATAGTGCTCGTGGTGGGCCTGATGCTGTG GTGTCGCTATCGCCGTCAAGCCAGAAAAGCCCGTTTAAACGATCTGAGCA CAAAGGAAGCTGGCGGGGATCAGCCGGATGTTGCTGGCAATGGCAAAGGC TCCGAGCAGGAGCCCTGCCTGTCTAAGCAGCACAATGGCCACAGCAAATC CAGATCCAAGTCCAGTGGAGATGCCCAGAAATCCGATGACACAGCCTGCA GCCAGCAGTCGAGGGCCTCAAAGAAATCGGCACATATTTACGAGCAACTG GCTCTGCCAAGATCCGGGCTCAGTGAACTCATACAAATTGGACGCGGCGA GTTTGGGGATGTGTTTGTGGGCAAACTTAAGGCTACCTTAGTCACCTCGC CCTCGGACAAGGATGCGGATACGGAAAAGCAGCACAGCAACAGTGAAAAT GGCAGTGGAGGCAGCGGAAGTGGAAGCACCACGCTAAGTACTCTAAATGA GAAGCGTCGCTCCAAGACCTCCATGGACGACATTGAGGAGATCAAGGAGG AGGAGCAGGATCAGCACAATCAATCGGGTCTCGAGCAGCTCGTTCTGGTC AAAGCCCTGAATAAAGTGAAGGATGAACAGGCCTGCCAGGAGTTTCGACG ACAGTTAGATCTGCTGCGCGCCATCTCGCACAAGGGAGTAGTACGTCTGT TTGGCCTGTGTCGCGAAAAGGATCCGCACTACATGGTGCTGGAGTACACG GATTGGGGCGATCTCAAGCAGTTCCTGCTGGCCACCGCCGGAAAAGTGAA CACTGCCACCGCGGGCAGCTCCTCACCGCCGCCACTCACCACCAGTCAGG TTTTGGCCGTCGCCTATCAAATTGCCCGAGGAATGGACGCCATCTACAGA GCTCGCTTCACCCATAGGGATCTGGCCACTCGCAACTGCGTAATTTCCAG TGAGTTTATAGTGAAGGTATCCTATCCGGCTCTCTGCAAGGACAAGTATA GCCGCGAGTACCACAAACACCGCAACACGCTGCTCCCGATCCGCTGGCTG GCGCCCGAGTGCATCCAGGAAGACGAGTACACCACCAAGAGCGACATCTT TGCCTACGGTGTGGTGGTGTGGGAGCTCTTCAACCAGGCCACCAAGCTGC CCCACGAGGAGCTGACCAACGAGCAGGTGGTGCAGCGTTCCCAGGCGGGC TCCTTGGAGTGGTCAGTGGCCGAGGCGACGCCCGATAGCCTGCGAGAGAT ATTGCTGTCCTGTTGGGTGTCCAATCCGAAGGAGCGACCTTCGTTCAGCC AACTGGGAGCTGCTCTCAGCAAGGCGATGCAGAGTGCCGAGAAGTGAGGC CAGACTGATGGCTCGATCATGCCAAAAAGTAATTCGTAGTATTGTCTTAG TGTCTGCACGCCCGAGTTTTGCTATGCGCTCAGAAACCTAGTCTTAAGGA TCGAAGGATAACTGCGCCTGTTTAACATGCGCATTGCGCACTTGGTGGCA CACAGAATGAAGTTAAGCAGCTACTGTACAAACACAATGTATGGAAATGG GGATATCTTCGTGAATAGTATTGCGTGGTGCTGCATATTTTTAGGTATGC AGCTAAAATGTACATAATAACTGCCACAAATATGCATTTAAACCAGTTGA AGCATTTCTAGGATTAGATCATTTCAACCTTCGTCAGCATTTAATAATCG ACTTCTAAGCTAAATTAGTAAATAAAATAAAATATAAATACACAAGCATA TGCATCACACAAAACAACGAGCGATTTCATTGTTTTCAAACATTGAGAAA CTAAGCCAAATTTTAAGTTTAGCATTAAATATAAATAACACACACCACCC ACATATTTTATCACAAGCCTAGTTATACACTTTTTAATGCGTAAGAAACA AACAGCCGAAACAATTTTATGACTAGCCATTTAAGCTTTGATGCATGTTT ACAAAACATTTAAATAAACTCGAATAAAATAAATTTAATCAGAA
Other Products of this Gene
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) otk-PA FBpp0087135 1033
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_078981
Synonyms
	CG8967-RA otk-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]