Transcript Dmel\Caki-RC

General Information
Symbol	Dmel\Caki-RC	Species	D. melanogaster
Annotation Symbol	CG6703-RC	FlyBase ID	FBtr0084163
Feature type	mRNA	Associated gene	Dmel\Caki
Created / Updated	2004-06-05/2004-06-05

Evidence Rank	Weakly Supported	Length (nt)	1963
Evidence Score	3

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 3 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	EK102018 RH46561 GM15368
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	ATTTCGCTGAGGCAGCCGCAACACAGTTGCAGTTGCTGAGTAAAAGTAGC TGAAATGGCAGAAAACAGTGAGCAGAAATGATATTCGTGCGCGCCCAATT CGATTATAATCCGCTGGATGATGAGCTTATACCCTGCGCCCAGGCGGGCA TATCGTTCCAAGTGGGCGATATACTGCAGATTATTAGCAAGGACGATCAT CACTGGTGGCAGGCGCGACTGGACACGGTGGGCGGATCGGCCGGACTGAT ACCGTCGCCGGAGCTGCAGGAGTGGCGGATCGCCTGCCAGACGGTCGACA AGACCAAGCAGGAGCAGGTTAACTGCTCCATCTTCGGGCGCAAGAAGAAG CAATGCCGGGACAAATATCTGGCCAAGCACAATGCCATCTTCGACACGCT CGATGTGGTCACGTACGAGGAGGTTGTCAAGGTGCCAGTTGGCGACCCGA ACTTTCAGCGCAAAACGTTGGTGCTCTTGGGTGCTCATGGGGTGGGCAGG CGGCACATTAAGAACACCTTGATATCGAAGTACCCCGACAAGTACGCCTA TCCCATACCACATACAACGAGACCTGCCAAACCCGAGGAGGAGAACGGAC GCAGCTATTACTTTGTCTCGCACGATGAAATGATGGCGGACATCGGTGCG AATGAGTACTTGGAATACGGCACCCACGAGGATGCCATGTACGGCACCAA GTTGGACACCATCCGACGGATTCACACCGAGGGCAAGATGGCCATATTGG ATGTGGAGCCGCAGGCACTAAAAATACTCCGCACCGCCGAGTTCACGCCC TATGTCGTGTTTATAGCGGCGCCCTCACTGCAGAACATAGCAGATTACGA CGGCAGCCTGGAGCGACTGGCCAAGGAGTCGGAGATGCTGCGCCAGCTAT ACGGTCACTTCTTCGATCTGACGATTGTGAACAACGATATTAGCGAGACG ATTGCCACGCTGGAGACGGCCATCGACCGGGTGCATACCACCCCGCAGTG GGTGCCCGTATCCTGGCTGTACTGACAAGACAGCGAACTGGAATGCCCCG ACTGCCTCGAGGGCTGTGAATGCGAGTGGGAAGCCTACACACAGGCCTCC AACGTAGCCCTATACTGAGGCACAGATGCAGATGCGCACGACGATGCAGA TACACGCCACATCACCACACCACACACACCATTAAAGTATTACCAAGGCA CAAGCAACAGCAACTGAAGAAGCAACACAGCAACCACTACGAGAGATGAC AGTCAGGACTGGAGGATAGAAGGCGCCTGGCGCCGAGCTATATAATTTAA GAATAAATGGGTATTATGGGAACTGCGGTCGCAACGCAATGACAAAAGTG TGTGTTAAACGACAAACAACCATTTGTATTTGCCTCTTATTTGTTTTCTG TTTTAACAGTATGTTTATTTTGTATTAATTTTAATCGATTGTATTTGCCA TTCCATGCTCAATGTGTTATATTTTACGATTATTGTTTTGTTGTATTTGT TTTATTCAGCATTTAGTCAAAACAGCATTAAACGCTTATGTAAATCTTGC ACTTGTTAGTGTCTAAGTTAAATGGAGTTAGACAAATCGAAACTGAAGCA CTCCAAATTGTTTTTACCTAATGATTATTTCCGGTAAGAGTCTTGTGTGC AGGTAGGGCGTCGAACGAGTTAGTAAATTATAGAAAAACTACGTAATTAA ATATAATTAAACATAGACACAAGGAGACACAACAGCAAAAAGAACACGAA GAACAGAAAAAATAAACAAATTACGATGTGAGCAATTTCAAGTGTTTCAA GCCAAGTAAGAACTAATTAATAACATATGGAAAATCAACTGAAGACAGTG GTGACGCAAAGTGCACGTTTTAAATGCAATAAAAAGGAAGGTAACAGAAA AACAAAAAATAAAATTAATTCAGATCACAACACTTACACACGGAGGAAAA AGAAAAAAAAAAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Caki-RA FBtr0084162 4129 Caki-RB FBtr0084161 4113 Caki-RD FBtr0112872 4032 Caki-RE FBtr0112873 2601
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Caki-PC FBpp0083561 315
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Caki-PA FBpp0083560 591 Caki-PB FBpp0083559 898 Caki-PD FBpp0111785 591 Caki-PE FBpp0111786 469
Comments
	Only one EST supports this alternative transcript
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_169971
Synonyms
	Caki-RC CG6703-RC
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]