Transcript Dmel\Fmr1-RA

General Information
Symbol	Dmel\Fmr1-RA	Species	D. melanogaster
Annotation Symbol	CG6203-RA	FlyBase ID	FBtr0082197
Feature type	mRNA	Associated gene	Dmel\Fmr1
Created / Updated	2004-06-05/2004-06-05

Evidence Rank	Strongly Supported	Length (nt)	4441
Evidence Score	11

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 42 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	SD08624 RE63618 EK068224 EK053438 AT20847 AT04068 AT24755 EK049622 RE16492 RE35852 EP02024 EK110951 EK154102 AT12584 RH42606 EK299622 EK248323 EK157812 LD44933 EK271252 EK196532 EK008739 EK157839 SD12232 EK163357 EK166762 AT19085 LD28903 RE24113 RE17792 SD19109 GH28743 EK136343 SD08054 SD02107 EK139742 GH26194 SD03860 EK054953
End(s) extend beyond the annotated transcript, internally consistent	EK042559 EP18717 AT25740
Sequence
	CACAAATCATTTATCAAAAATTTCGTATCTTATTTTCACAAATTTATCGC TTGGGCCAAACACGCCCGAAATCTAGCCAAAACCATCCGAAGTGGCCAGT AACGCGCGCCGATTGTAAACGGGTGGCAACTCCAGTAGAACGTTGCCGAG CTGCGAAAGTGTGCAAAAGCAAAACGAAGAGAACGCAGCGCAGCCGAAAA AAATTGAAGCAGCACTGCACGCGATATATTTTGTATTTTCAAAGGTTAAA GCCGCATTCACAGGCATCCGCCGAGGGCAAACGAAGTGCAAAAGTGCCGG CCAGCAGCAACATTTGAAGCAGCAGCCGCCAAGCAAAAGACTGATTTGAG TACAAGGAACTAGAAGCAGGAACGCGAGGTTTCTGCCACTGCACACTGAA TTGAGCCCCAGATAACGCGGCAAACTGCAGTCGACGGGGAAAAGTCGGGA GTTGAAGGCTGGGCAGCATCAGCATCAGCAGCAGGAGGGACAGGGACGGA CGGCGAAGAACCACCAGAACCAGAACCAAAACAAAGCGGATAAACCAGGA GGCACTACGTCTGGCGATATGGAAGATCTCCTCGTGGAAGTTCGGCTCGA CAATGGCGCCTACTACAAGGGCCAGGTGACAGCTGTCGCCGATGATGGCA TCTTTGTGGATGTGGACGGCGTGCCCGAGAGTATGAAATATCCATTTGTG AACGTTCGCCTGCCGCCCGAGGAAACCGTTGAGGTGGCCGCACCGATCTT CGAGGAGGGCATGGAAGTGGAGGTGTTCACGCGCACGAACGATCGGGAAA CCTGCGGCTGGTGGGTGGGCATTATTAAAATGCGCAAAGCGGAAATCTAT GCGGTCGCGTACATCGGTTTTGAGACGTCCTACACCGAAATCTGTGAATT GGGTCGTCTGCGCGCCAAAAACTCGAATCCGCCAATTACAGCCAAGACCT TCTACCAGTTCACGCTGCCCGTGCCCGAGGAGTTGCGCGAAGAAGCCCAG AAGGATGGTATACACAAGGAGTTTCAGCGCACAATCGATGCCGGCGTGTG CAACTACAGTCGCGATCTGGACGCCCTGATTGTCATCTCCAAGTTTGAGC ACACTCAGAAGCGAGCCAGTATGCTCAAGGATATGCATTTTCGTAATCTC TCACAAAAGGTTATGCTGTTGAAAAGGACTGAAGAAGCTGCCCGTCAGCT CGAAACAACTAAACTGATGAGCCGTGGAAACTACGTTGAGGAGTTCCGTG TGCGTGACGATCTCATGGGTTTGGCGATTGGCTCGCATGGCTCGAATATT CAAGCGGCACGCACTGTGGACGGCGTCACCAACATCGAGCTGGAGGAGAA GTCCTGCACATTCAAAATCAGCGGAGAGACCGAGGAGTCTGTGCAGCGTG CCCGCGCGATGCTCGAATACGCCGAGGAGTTCTTCCAGGTGCCCAGGGAG TTGGTGGGCAAGGTGATTGGCAAGAATGGGCGCATTATCCAGGAGATTGT GGACAAGAGTGGCGTGTTTCGAATCAAGGTGAGTGCTATCGCTGGCGACG ATGAACAGGATCAGAACATACCACGTGAGCTGGCGCATGTACCCTTTGTG TTCATTGGCACCGTGGAGAGCATTGCAAATGCCAAAGTGCTGTTGGAGTA TCATCTGTCGCACCTGAAGGAAGTAGAACAGTTGCGTCAGGAGAAGATGG AGATTGATCAGCAGCTTCGCGCCATCCAGGAATCCTCCATGGGCTCCACA CAGAGCTTCCCAGTGACGCGGCGCTCTGAGCGCGGCTACAGCAGTGACAT TGAGTCGGTGCGCTCTATGCGCGGCGGTGGTGGCGGCCAGCGTGGTCGTG TACGCGGACGTGGTGGTGGCGGTCCTGGAGGTGGCAATGGCCTGAACCAG CGCTACCACAACAATCGCCGCGACGAGGATGACTACAACTCGCGGGGCGA TCATCAGCGTGACCAGCAGCGTGGCTACAACGATCGCGGCGGTGGTGACA ACACTGGCAGCTATCGTGGAGGCGGTGGTGGCGCCGGTGGTCCTGGCAAC AACAGGCGCGGCGGAATCAACCGCCGGCCGCCACGCAACGATCAGCAGAA TGGCAGGGACTATCAGCACCACAACCACACCACCGAAGAGGTGCGGGAGA CCCGTGAAATGAGCAGCGTGGAGAGAGCGGACAGTAACTCATCGTACGAA GGTAGCTCGCGGAGGCGCAGAAGGCAGAAGAACAACAATGGACCCAGTAA CACAAACGGAGCTGTTGCCAATAACAACAACAAACCTCAGTCGGCGCAGC AGCCACAACAGCAGCAGCCGCCGGCGCCTGGGAATAAGGCGGCACTAAAT GCCGGAGATGCCAGCAAACAGAACAGCGGCAATGCGAACGCCGCTGGCGG TGCGAGCAAGCCGAAGGATGCCTCACGCAACGGCGACAAGCAGCAGGCGG GCACACAGCAGCAACAGCCATCGCAGGTACAACAGCAGCAGGCGGCACAG CAGCAGCAGCCGAAACCGCGACGCAACAAGAATCGCAGCAACAACCACAC GGACCAGCCATCCGGACAGCAGCAGCTGGCGGAGAATGTCAAAAAGGAGG GCCTGGTCAATGGCACGTCCTAAGCCGAGTGGCCAAAGCGGTAGGAGGAG CAACAGCTCACAGATGGCTAGAACAACATGAACACGAATTGCACATCGTT CGACGGAGTAACAATGTTGTATGCGCAGCGGGGCAGTTTAATAATCATGT TGATGTCCTTGAATGTAGCCGCCACATAACACAACAACCAACAACAACCA CACAACACAACACAACTCAACAACAAACAAAACATCCGATCAACATCAGA CACTAGAACAACATCATCAGCCAACAACAAGCTCCACTAACCAATTGTTT GAGAAACTATAAGAGTAACTAAAAAAATAGGAATCGAAAAATTATATACA TGAAATATGTAACAAATGTGAAAGCATATACTAACACACACACACACTCA CACAAGGATACACTCACACACAACCACACACACAATACAGTTCGAATTAT ACACAAAAAGGAGGAAGTAATAAAAGAAAATTCATGCCTAGGCTTATAAT TTGAATTGAAACTAAAAAAGCTTCAATAACAATCAAAATGAATTATATTT ATGTATAAAAGAAACTCAAAGGCAATTATTAACAAGCAAAACGAACGAAT CGAAAGTGAAACATTGAATATGTAAACTAAAACTTTAACTCTAATCCGGG CAACTAGGCGTAGTTTTTCGAAAAGAAAATCTAAAGAAAACCTGACGAAA TGGGCGCTTCAAAAGCGCCCCTTTGCGTCAACTTGAAAAGTTTCTAGTTA TATGCATATTATAATAAAACGAGAATGATATAATTGCATTTTTGTTTTGG TTAAATTAATTTTAGTTGTGTCTGTCATGTGTTTGTTTTTGTGTATAATT CGTGCATGCAACAACTTAATCGCCTAGCAGGTTTTTCTACATTATCATTA TTTTTGTATTATTATATTTTAGTTTACTAATGTAAATGCCCAGGCGCGTT TAGAAGTTGCTTATAAATTTCGAAAGCCACGGCGAACAATTTCATTTGCA GGTGAATGTCTGCAAAGGACTTGTTCGTCGTGAGCTTTTGCATCGTTTCA TTGTTTCATTGTTTATTTTGTTCGTTACAACATGGAAATCCTCTCTTAAT TGTATAATTTTGTATTTATTTACTATTATTAACACATCCCACACACCACA CACGCCACACTCACCCGCATACACGAATATCAATTCTCACACACACGAGC TCGCTCATACAAAACAGAAGGGAAACGCATTAATTTTGATTTTGTTTTAT AAATATATAATTTACTTCGCCAAACCTACAAAGCGTATACTAACTTAGTC CTCTATTAAATACTCTTAAATTATTTAAAACAAGTAAAACGTGCCGAGTC GGGAGAGGAGCATTGAACACAATCATCGAGTGACGCGAATCATTTCAATT GAATCATAATAGAAGACCCAACTATGGAATATAAATACACAATGTAAAGC CACCATAAAGAAACCATCTAAGAACAAATAGCAAGAAGCAGAACAGAACA ATTCTTTCCTCTTATTTGGAAGAACAGTGTCAATAATATGTAAGAAAGGC AAACCACACATTTTAACATACATTAAAGAAGGAGATAACGATAATGGTAC CGATAAAGATAAATCTAAATAATGTTGTGTAATTCAAATTAAAACAAATA AAACAAAAATCCAACTAAATGGAAACGGCATAAAAGAAACGTAATAATAT AAATATAATGAGAAAAATGTGCGATTTAAATTTATTATTTATATAAAGAT GAACTTATAAAGAATAGAAATATAGCAAGTAAATTTTATTAATTTAAAAT TTATATATATAAAACAAAACACAAACCATCAAGCTAAAGAC
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) Fmr1-RB FBtr0082196 2267 Fmr1-RC FBtr0082198 4432 Fmr1-RD FBtr0082199 4278 Fmr1-RE FBtr0082200 3895
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) Fmr1-PA FBpp0081675 684
Derived from OTHER transcripts	Name FlyBase ID Length (aa) Fmr1-PB FBpp0081674 529 Fmr1-PC FBpp0081676 681 Fmr1-PD FBpp0081677 681 Fmr1-PE FBpp0081678 643
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_137801
Synonyms
	CG6203-RA Fmr1-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]