Transcript Dmel\pcm-RA

General Information
Symbol	Dmel\pcm-RA	Species	D. melanogaster
Annotation Symbol	CG3291-RA	FlyBase ID	FBtr0074784
Feature type	mRNA	Associated gene	Dmel\pcm
Created / Updated	2004-06-05/2004-06-05

Evidence Rank	Strongly Supported	Length (nt)	5333
Evidence Score	11

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 19 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	LD22664
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	AT01889 LD34993 AT17440 AT20701 LD24464 LD44093 AT23995 GH11392 EP08531 GM02716 LD24588 LD26388 EK204862 AT19150 LD29795 EK197318 LD42194
End(s) extend beyond the annotated transcript, internally consistent	LP20018
Sequence
	CCTCGCCTACTTGCAACTTTTGTGTCAATCAATACATGTTGAAAACAGAT AAAGACACAAATTTTTCAGTTCATCTAAATTGCCACTGATCCAGGCAGAA CAGCACGGCGGCAGAACAGTCCCATCCAGAACAGCGACATGGGCGTTCCC AAGTTCTTTCGCTACATCAGCGAGCGATATCCGTGCCTCAGCGAATTGGC GCGGGAGCACTGCATACCCGAGTTCGACAATCTGTACTTGGACATGAACG GCATTGTCCACAACTGCTCGCATCCGGACGACAACAACATACACTTTCAC CTGGAGGAGGAGCAGATATTCCAGGAAATCTTCAACTACGTAGACAAGCT GTTCTACCTGATCAAGCCGCAGCGCCTCTTCTTCCTTTCAGTTGACGGGG TGGCTCCACGGGCCAAGATGAACCAGCAGCGCAGCCGGCGATTCCGGACG GCGCGCGAGGCGGAGCAGCAGGAGGCCAAGGCGGCCCAGCGAGGCGAGTT GCGAGAGCACGAGCGCTTCGACAGCAACTGCATTACGCCGGGCACCGAAT TCATGGTGCGTCTGCAGGAGGGACTGCGCGCCTTTCTCAAAACGAAGATT TCGACGGATCCGCTGTGGCAGCGTTGCACCGTAATCCTAAGTGGCCAGGA GGCGCCCGGCGAGGGCGAGCACAAGATCATGGACTACATTCGGTACATGA AGACGCAGCCGGACTATGATCCCAATACACGACACTGCCTTTACGGCCTG GACGCCGATCTGATCATTCTGGGCCTCTGCACCCACGAGCTGCACTTCGT GGTGCTGCGCGAGGAGGTCAAGTTCGGGCGCAACGTCAAGCGCACCTCGG TGGAGGAGACGCGCTTCTTCCTGCTGCACCTGGGTCTGCTGCGCGAGTAC CTCGAGCTGGAGTTCGACGCCCTGAGAACAGACGAGCACAAATTGGACAT TGCGCAGCTTATCGACGACTGGGTGCTGATGGGCTTTTTGGTCGGCAACG ACTTCATTCCCCACCTGCCGTGCCTGCACATTTCATCAAATGCACTGCCG CTGCTCTACCGCACCTACATCGGCATTTACCCGACCCTCGGCGGCAACAT CAACGAGAACGGCAAGCTCAACCTGCGCCGCTTGCAGATTTTCATATCGG CCCTCACCGAGGTGGAGCTGGATCACTTCAAGGAGCACGCCGACGACTTG AAGTACATGAACAACAAATCAGAGGCGTTCGACATGGACGTCGGCGAGAT CACCGAGTCTCAAAACCTCGACTCCGATCTCGGAGCCCTCATCAACAAGA GCATGCTGCTCTACGATGACGACAGCGAGGAGGACTGCTCCGACGAGAAC GCGGTTCTTCTGAAGGAGTTCCAGAACTACAAGCGAAACTTCTACCGCAA CAAGTTCAAGCGTGATCCGAATGATGAACTGATCGAGGAACTGTGCCACC ACTACGTCAATGCGCTGCAGTGGGTGCTCGACTACTACTACCGTGGCGTG CAGTCCTGGGACTGGTACTATCCCTTCCACTACACTCCATTCATCAGCGA CCTCAAGAACATCGAGCAGGTGGAGATCGCCTTCCACATGGGCACGCCCT TTCTGCCATTCCAGCAGCTTCTGGCGGTACTGCCGGCGGCCAGTGCAAAG CTTCTCCCTGTCGCCTACCACGACCTCATGCTGCTGCCGACCAGCCCGCT GGCCGAGTTCTATCCACTGGAGTTCGAGAGCGACCTCAATGGCAAGAAAC ACGATTGGGAGGCGGTTGTGCTGATACCCTTCATCGATGAGGGTCGGCTG CTGGCCGCTATGCTGCCATGCGAGGCTCAGCTGTCGCTGGAGGAGCGCGA ACGCAACCGACACGGTCCCATGTATGTGTACAAATACAGTACGGTGGCGC AGGGTCCCATGCCAGCGTATCCACCGCTGAGGGCTCTTCCCGTGCTCTAC TGCACGGAGGTGGCCAAGTGGTCGCACGAAATCGCAGTCAATCTGCCGTA CAGCGTGTGCATCGAGCTACCAAATGCGGCGAGAACCGTTTTCTTCCCGG GATTTCCCACCATGCAGCATCTGCCCTTCGATTTCGAGCTGCGCAACGAC CGCGTCAAGGTGTTCGAACAGGTCAGTCGCAACCAGAACATTGTGCTAAA ACCACGCAAGCGCCAGCTGGAGGACACACTGACGGCGGTGGCCTCCCAGT ACCTCGGGAAGGTGATCCACGTCGGCTGGCCGCATCTCGTCAAGGCGATA GTGGTGCGCGTGGCCACGCGAGATCAGCGCGTCGACAGCGAGGGAATCAC GCTAAACGATTCGCGGCGTTTCGACTCGGAATGCAAGGCACTGCAGGAAC ACTTTATCAATCGTATGGGAATACAGTTTGCCAACTATGATGTGCTCGTC TATGTGCGCACCTTTGCCGGCAATTCGACGGAGTTCCGCGACAAGGGGGC ATTGATGGTGCGCGACTCGTGGAGCAGCTCCGTCACCGGCTATCCAGCCC AGGGCGTGGTGGCCGATCTGACTGTGTGGGAAAGAATGCGCAAGAATTTC CTCAACGTGGAGCACTACTTCCCCGTTGGCAGCACGATCTTCTTGATCAC GGATCCGTATTACGGCAGCGAGGGAACTGTGCAGGACCCACGGCTGGCCT ACACCAACGGCCGGATTCAAGTCAGCATCATGGTGCGACCGGAACCGAAA GTAAATGCGGCACGTCAGCTGCAGGAAGAGCGGGACCGGGACTATCTGAG CACCTTCCAGGTCTGCAACTTGCTCCGAATCAGTGGCCGCACCCTGGGAC GCCTAAGTGGCACCGTGTGGGTGGTGCTCGGTCCGCGGCGTCAGAAGATG GAAAACGTGACCAAGCACAACATTGGCCTGCAGCTCAAGTATCCGCGGCA GAACGAGGAGCGTGCCGGATACTGCTTCCGCACGAACAACCAGTGGTACT ACTCCAGCCTGGCCGTGGATCTGATGCGCAACTATTGCCAGCGTTACCCA GACGTTATCGACTTCTTTGGCGACTCCAACGATCGCGCCGAGTTCGTATT CGAACAGGACGTGTTCCCCAATGCGGTTGGCCATCGCCGCGTCGAGGAAC TGGCCAACTGGGTGCGCCAGCAGCCGCACATGAAAGTGGAGCGCATCTCT TGCGGCTCCAAGACGGTCTGCCGCGAGACCATCGAACTGCTGATAGCCGC CGTCGACGACCTGCGCTCACTGCCCGTCAAGCACGTTAAACTGCAGGTGA AGCCGCACTTGCTCATCAAGCCCAATGTCACACTGCCAGATGTCTACCGA TCAAAGCGCCCGGTGCGTCTCTTCGATCGCGTCGTAATCGTACGCACCAT TTACATGGTGCCCGTGGGCACTAAGGGCACCGTGATTGGCATTCATCCCG TTACGGACCCCAACCCGGTCCGCCTGGAGTGCGTCCATGCTGTCGACACG TTCTGCAAGGTGCTGTTCGACAGCCCCGTTCCGAACTGCAACAACATCCA TGGCATCGCCGAAGACCGAGTTTACAAGGTGCCCGAAATTGCCCTGGTGA TCATCAAGACGGATGAGGAAGGAAAGAAGCAGAACGACTGCGAACTGCCG GTGAGGGATCCTCAGCCGAACCAGGCACAGGACGAGCCAGTCCGCGCGAC CAGCAGTCGCTATGTGACCGCCGCAGGGTCCACCTCGGTCCCGATCACGA TGAAGACCCAAATTAGCGACGAATTCGTCAAGACGCGTAGCGATCCGATA GCCCGTACGGATTCGTACAAGCCATCGTCGGAGCCAAAACCGGTGCCGGT GCCGGAGCAGATTACCAACTGGCGGGAACGCGTCAGTACGCCAACAAACA AACCGCAGCCTGCGCCAAATAATTGGCGCATAAATCGGTCTTCATCACGT CAACAGGGCGGTAGTATTTTTGTTGCTCCGCCCACAAAAACTCCTGATGC AGCTGCAAGCACTGCTTCCACTGCATTCACCGCAGCCTCGTCCGCAACGC TGACTCCTCTGGATCAGACCTTGGCGCTCATGTCGGTTTTGGGCGTGGGT GAGGACCAGAGCTCGCCGCCACTCCAGGAGGCGGTGCAGCAGCAACGTCC GCCACTACTTCAACAGCAAAGAGCTCCGTTTCCCGGACAAATGCCCAATC TACCCAAGCCACCGCTCTTCTGGCAGCAAGAGGCGCAGAAGCAGGAGGCG CTGCAGCAGGAGGCGCAGCAGCAGGAGGCGCAGAAGAAGCAGCAGCAGGC GCATGCGCAAATGGAGCCTGAACGTATCAATAGCCAGCATTTCTACAGAA GCGGCCAGACAGGAGCGGCGTTGAATCAGCCGCCATTGGGTGCTCCATCA AAAAGGCAGTGGCATGAGTGGGTGCACCCGCGCATGCAGCACGCCAACGC ATTCCACGCTGGCGTCAACAATGGATATCAGATGCGTCCCAAAAAGAATA TAGCTGCGCAGAGCACCTTTAACAACAACGTGCACATGCACCTCCAGCAA CCATATTACCCGAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACTCCA GCTGACGGAGATCAACAATGCGCCACCGCGATACTCAACGATCCAAGATT TTGTGCCCATACAGGCGTACCGTCCCAAGAAATTAAATCGCGTCCAACCA GCCGGTCGTCAGGACGTCGATGCCACCAAGAATCCTAGTCGTTCGCCTGT GTTGCAGCAACCGACGAACGAGACTATAGACACAAAGGCCAGTTCTAGTC TTCCGGTACAATCAGCAGGCGAACAGGTGATTGGACTGATGCAAACGCTT GAAATTAAGCCGGCTGCGTCGCAGTCCGAATCTGATGGGGTCTCAACAGG CAGTGCGAACGCGCCCACAGCAACGACATCATCCCAGGCGGTCAACCGAA GGAAGCATCGAGTGCCTCGCATCGGAGCCAAGTTCGACTTGGAATACATA CTGCCCGACTCCCCGCATCCAACTTAAGAGCGAACAAATGGGTATTTTTA GGTTCAAATCCCACCTAGCTGAAGAAATGCAACGCTATTTGGATCTTATA TCACCTTATTTCTATCTCTCCTAGTCTGTGCGAGGCACTAGAATTGCCGC ACACGATAGATCATTTTTTTTTTAGAGTTGCGGATTATGTGAATACTAAA ATGAGACTGACTCGTCTTTATATTTTTTCAATAAACTGGACTTTACCCAT ATTTTGTTGTTACTCGATAGAATGCCAAGCTGCATTGTGTAAATTAGCTT TTAAGAAGGATCTGTCCTATAAGACGTATTTTGTTTTGAATAAAGCTGTC AGTGCCACGCAATCTGTGGCTAATTTCAAATGT
Other Products of this Gene
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) pcm-PA FBpp0074553 1612
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_078684
Synonyms
	CG3291-RA pcm-RA
References ( 2 )
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]