Transcript Dmel\sdk-RB

General Information
Symbol	Dmel\sdk-RB	Species	D. melanogaster
Annotation Symbol	CG5227-RB	FlyBase ID	FBtr0070132
Feature type	mRNA	Associated gene	Dmel\sdk
Created / Updated	2000-01-06/2004-06-05

Evidence Rank	Strongly Supported	Length (nt)	8904
Evidence Score	15

Map ( GBrowse )
cDNA Clones Consistent with the Transcript ( 29 )
cDNA Clones, Fully Sequenced
Exact Match
Contained within the annotated transcript, internally consistent	IP16011
End(s) extend beyond the annotated transcript, internally consistent
cDNA Clones, End Sequence Only (ESTs)
Contained within the annotated transcript, internally consistent	EK193901 EK142851 EK104962 EK136005 EK288304 LD42472 LD26517 LD07652 EK194559 GM02010 LD21779 EK280755 EK266096 EK286529 EK068632 EK022138 LD22445 LD38885 EK295308 EK176337 EK276850 EK147233 EK148562 EK048462 EK286905 EK298625 EK202957 IP16111
End(s) extend beyond the annotated transcript, internally consistent
Sequence
	AGTTCGTTTTGTGCGCGCGTAGTGAACGGTTGTCTTTCGGTTGCTCGTCG GGGAGTTGCAAATTCAGCGACAGCAGCAACTACAAATGGCGACTTGTGCC TGTCGGACCCTCGAGTTCATTGTTAATTGTTAATCGTTGTGGTGCTAAGC GTTGGCCGAACGGTTTATGGGTATATGGTAACCCTGGTGGCAGAAAGAAG AACATACTTGTGTCCAGAAGGAAGGAGGAAAAGCACCAAAAAAGATGTGA GCGATGTGTAATTAAAACTAGACTTTTCACTAAAAACTAGAAGAGCGAAG GAAGGCCGCTAAGAAAACAAAGCGAAATCCCAGAAATACGAATACCGAAA GGCAACAACAAATGCTCAAATCTGCGGCGTCGTCGCTGCGTCGACGTCGT CCAAAAACAACAATAACAGCAACATTAGCCATCGAGATGCCGTCGCAGCC GAAGTTGGCGTCTCTGCTTGCAGTGCTGGTTTTGCTCTGCTACTGCGACA GCTGCTTTTTTTGTTACGCGGATGCCAATCTACAGCAGCAGAATTCAATC GTTCAACAGCAGCAACTTCAGGCTCCTCGGTTTACCACACATCCATCGTC ATCGGGATCGATTGTCAGCGAGGGCAGCACCAAGATACTTCAGTGTCATG CGCTGGGATACCCGCAACCCACATATCGATGGCTAAAGGACGGCGTCCCC GTGGGCGACTTCTCATCCAGCCAGTTCTACCGATTCCACAGCACCCGGCG CGAGGATGCGGGCAGCTATCAGTGCATCGCCAGAAATGATGCCGGATCCA TATTCAGCGAAAAGAGCGACGTCGTCGTGGCCTACATGGGCATCTTTGAG AACACCACAGAGGGTCGTCTGACGGTGATCAGTGGTCACCCTGCGATATT CGATATGCCCCCCATTTGAATCCATACCCGTGCCGTCGGTTATGTGGCAA TCGGAGGATGGACCTCTGAATTACGACATCAAGTACGCCTTCACCCACGC CAACCAGTTAATTATTTTAAGTGCTGACGAAAACGATCGCAAGGGATACC GGGCTAAGGCCATTAACACGCAGTTGGGCAAAGAGGAGAGCAGCGCCTTT GTGCACCTGAACGTCAGTGGAGATCCGTACATCGAGGTGGCGCCCGAAAT CATAGTGCGCCCGCAGGACGTTAAGGTCAAAGTTGGTACCGGAGTGGTTG AGCTGCAGTGCATTGCGAATGCCAGGCCCTTGCACGAACTGGAGACGCTT TGGCTGAAAGACGGTCTCGCCGTAGAAACTGCCGGAGTGAGGCACACTCT CAACGATCCATGGAATCGAACGTTGGCCCTGCTGCAGGCGAACAGCTCAC ATTCCGGGGAATACACCTGCCAGGTGCGATTGCGCAGTGGTGGCTACCCA GCCGTCAGTGCTTCGGCTCGCCTCCAAATCCTCGAGCCGCCGCTCTTTTT TACACCCATGCGGGCGGAAACCTTTGGCGAATTCGGAGGACAGGTGCAGC TAACCTGCGATGTGGTCGGCGAACCCACGCCCCAGGTCAAGTGGTTCAGG AACGCAGAATCGGTGGATGCACACATTGAGAGTGGAAGATACACGTTGAA CACGGATAATACGCTGGTAATTAAGAAACTAATCCTGGATGATGCTGCCA TGTTTCAGTGTTTGGCCATCAACGAAGCGGGGGAGAATTCGGCGAGCACC TGGCTGCGCGTAAAAACATCGGCTCCAATTATGGAGCTGCCGCCCCAAAA TGTGACCGCCTTGGATGGCAAGGACGCAACTATTTCCTGCCGGGCAGTTG GATCGCCCAATCCCAACATAACCTGGATATACAATGAGACACAACTGGTA GATATATCCAGCCGGGTGCAGATACTTGAGTCGGGTGACCTGCTCATCTC GAACATCCGATCTGTGGACGCCGGCCTGTATATCTGCGTACGAGCCAACG AGGCGGGCAGCGTCAAGGGCGAGGCCTATTTGAGTGTTTTGGTGCGGACG CAAATCATCCAACCGCCTGTGGACACAACGGTGCTACTTGGCTTAACGGC CACCCTGCAGTGCAAGGTGTCCAGTGATCCCAGTGTCCCGTACAACATCG ACTGGTATCGCGAGGGTCAGTCGTCGACGCCCATCAGTAATTCGCAGCGC ATTGGTGTCCAGGCGGACGGTCAGCTAGAGATCCAAGCGGTGCGGGCGAG CGACGTCGGGAGTTATGCCTGTGTGGTCACTTCTCCCGGGGGAAATGAGA CGCGAGCCGCCCGCCTCAGTGTCATCGAACTCCCGTTCCCACCCAGCAAT GTGAAGGTGGAACGACTGCCGGAACCGCAACAGCGCAGCATCAACGTGTC CTGGACTCCGGGATTCGATGGCAACAGTCCAATATCCAAATTTATTATCC AGCGACGTGAGGTCTCAGAATTGGAAAAATTCGTAGGTCCAGTTCCAGAC CCTCTGCTCAACTGGATTACCGAGCTGAGCAATGTCTCGGCGGACCAACG TTGGATCCTGCTCGAAAATCTCAAGGCGGCCACCGTTTATCAGTTTAGGG TTAGTGCTGTCAATCGGGTGGGCGAGGGTTCGCCATCGGAACCCAGTAAC GTCGTCGAGCTGCCCCAGGAAGCTCCTTCGGGTCCACCGGTGGGATTTGT TGGATCCGCCCGCTCGATGTCAGAGATCATCACGCAATGGCAGCCACCGT TGGAGGAGCATCGCAATGGCCAGATCCTGGGATACATTCTGCGGTACCGC CTATTCGGTTACAACAATGTGCCTTGGTCCTACCAGAATATTACAAACGA AGCGCAGCGCAACTTCCTGATTCAAGAACTGATCACCTGGAAGGATTACA TCGTGCAGATCGCAGCATACAACAACATGGGCGTGGGTGTCTACACCGAG GGCTCCAAAATTAAAACCAAGGAAGGAGTTCCAGAAGCACCCCCCACAAA TGTAAAAGTAGAAGCTATAAACTCGACGGCAGCCAGGTGCCGGTGGACTC CACCCAATCCGCAGCAGATTAACGGCATCAACCAGGGCTATAAGATCCAG GCATGGCAACGTCGGTTGATAGATGGCGAGTGGAGGGACATTGAGCGACG AATGAAGACAGTGCCACCTAGTCTGATTGATCCACTGGCGGAACAGACAG CTATCCTCGGAGGACTTGAAAAATTTACCGAGTACAATATTAGTGTGCTC TGCTTCACGGACCCTGGCGATGGTGTGGCCAGTAGTCAAGTGGCAGTTAT GACCATGGATGACGTACCCGACGAGGTGACTGGATTGCATTTCGATGACG TCTCCGATAGATCCGTAAAAGTTCTATGGGCGCCACCGCGCGCTTCGAAC GGTATCCTAACGGGCTATACGGTTCGCTACCAAGTCAAGGATCGTCCAGA TACCCTGAAATCCTTTAATCTGACAGCGGATGATACAGAGTTGACAGTGA ACCAATTGCAGGCTACCACGCACTATTGGTTTGAGATCGTCGCGTGGACG CGTGTGGGCAGTGGAATTCCGAAAACAGCCACCATTCAGTCTGGCGTAGA GCCAGTTCTGCCGCACGCACCCACTGCTCTGGCATTATCCAATATCGAAG CCTTCTCTGTTGTTCTGCAGTTCACTCCGGGCTTTGATGGCAACTCCAGC ATTACCAAATGGAAAGTGGAGGGACAAACGGCCAGAAATATGACATGGTT TACCATTTGCGAGATTAATGATCCCGATGCAGAGACCTTGACCGTCACTG GCTTGGTGCCGTTTACCCAGTACAGACTGAGATTGAGTGCTAGTAATGTG GTTGGTAGCTCGAAGCCCTCGGAGGCAACCAAGGATTTCCAGACGATCCA AGCCAGGCCCAAACATCCACCGTTTAACGTAACCGTGCGGGCAATGAGTG CTCAACAACTGCGTGTTCGCTGGATTCCACTGCAACAAACTGAATGGTAT GGAAATCCCAGGGGCTATAATATATCCTACAAGCAGCTGGTCAAAACTCC CGGGACCATTAAATACGTACCCCGGTCGGTGGTAATCGAAGATCACACCG CCAACTCCCACGTGTTAGATAGCCTGGAGGAGTGGACACTGTATGAGGTG AAAATGAATGCCTGCAACGATGTGGGATGTTCTAAAGAGAGTGACACTGC CGTGGAGAGAACTCGCGAAGCTGTTCCTAGCTATGGACCCCTGGATGTCC AGGCTAATGCCACATCATCCACCACAGTGGTTGTGCAATGGGGTGAGGTG CCCCGACAACACAGAAATGGTCAGATAGATGGCTACAAGGTGTTCTATGC CGCTGCAGATCGGGGACAACAGGTGCTGCACAAGACGATACCCAATAACG CCACATTTACCACAACCTTGACGGAACTGAAAAAATATGTGGTTTACCAT GTTCAGGTTCTGGCCTACACCAGATTGGGTAATGGTGCTCTAAGCACCCC ACCCATTCGAGTTCAGACCTTTGAGGATACCCCTGGAGTGCCATCGAACG TTAGTTTTCCGGATGTCTCCTTGACCATGGCTCGCATAATTTGGGATGTG CCTGTGGATCCTAATGGCAAGATCTTGGCTTATCAGGTCACGTACACATT AAATGGTAGTGCCATGCTGAACTACAGCCGAGAGTTTCCGCCTTCCGATC GCACATTCCGGGCGACGGAATTACTTCCCGGAAAGTATTACAGCTTTAGT TGTACGGCTCAAACGCGACTGGGATGGGGAAAAATAGCTACTGCTCTCGT GTACACTACAAACAACAGGGAGAGACCTCAGGCACCTTCGGTTCCGCAAA TATCACGCAGTCAGATTCAGGCCCATCAAATCACCTTCAGTTGGACACCA GGAAGAGATGGCTTTGCGCCACTTCGCTACTACACAGTGGAAATGCGTGA AAACGAGGGCAGGTGGCAACCACTTCCAGAGAGGGTGGATCCATCTCTTA GTTCCTTTACAGCAGTTGGTCTGAGACCCTATATGACATATCAATTCCGC ATACAGGCCACCAATGACTTGGGACCATCCGCCTTTAGTCGGGAAAGTGT GATCGTGAGAACTTTACCCGCTGCTCCGGCAGTGGGAGTTGGAGGTCTCA AGGTAGTTCCCATAACCACAACTTCGGTGAGGGTGCAATGGAGTGCTCTG GAGACTGCATTGTGGAATGGTGATGCCTCAACTGGTGGCTACAGGATTTT ATATCAACAACTTTCCGATTTCCCCACCGCCCTGCAGTCTACACCCAAAA CGGATGTGCACGGCATCAATGAGAACAGTGTGGTTCTGTCGGATCTTCAA CAGGATCGCAACTATGAAATTGTGGTGCTACCATTTAATTCCCAGGGCCC TGGGCCAGCCACACCCCCAGCAGCGGTCTATGTGGGCGAAGCGGTGCCGA CTGGGGAACCGAGAGCCGTAGATGCAGCACCCATTTCCAGCACAGAAGTG CGATTACTGTGGAAGCCACCAAAGCAGAGCATGCAGAATGGAGATATTTT AGGATATAAGATCTACTACCTGGTTACTTATTCACCGCAAGCGTTGGAAC CAGGTCGCAAATGGGAGGAGGAAATCGAGGTTGTTTCGGCCACGGCAACT TCGCACAGTCTCGTGTTCCTTGATAAGTTCACCGAGTATCGCATCCAACT GCTGGCCTTCAATCCGGCGGGAGATGGACCACGATCCGCCCCAATTACCG TGAAAACACTGCCAGGAGTACCAAGTGCTCCACTTCACCTTAGATTTTCA GATATCACTATGCAGAGTTTGGAGGTTACCTGGGATCCACCAAAGTTCCT CAACGGTGAAATCTTGGGGTACTTAGTCACGTACGAAACCACCGAGGAGA ATGAAAAGTTCAGCAAGCAAGTGAAACAAAAGGTATCTAATACAACACTG CGTGTTCAAAATCTCGAGGAAGAGGTCACCTACACATTCACTGTCCGTGC TCAAACGTCCGTCGATTACGGCCCGGGTATAAGTGAGAATGTGACGACAG GACCCCAAGATGGATCCCCAGTTGCGCCGCGTGATCTCATCCTGACCAAG ACGCTATCCAGCGTGGAAATGCATTGGATAAATGGTCCTTCTGGGCGGGG ACCCATTTTGGGCTATCTTATCGAGGCAAAGAAGCGAGACGACTCACGCT GGACAAAAATCGAGCAGACCAGAAAGGGCATGATGCAGGATTTTACGGTC AGCTATCACATACTGATGCCCTCCACTGCGTACACTTTTCGTGTGATTGC CTATAACCGTTACGGCATTTCGTTTCCCGTGTACTCCAAGGACTCGATCC TGACACCCTCCAAACTCCATCTGGAATATGGTTACCTGCAGCACAAGCCC TTTTATCGGCAAACCTGGTTTATGGTTTCGCTGGCGGCGACTTCGATTGT GATCATCGTGATGGTTATTGCTGTGTTGTGTGTCAAGAGCAAGAGCTATA AATATAAACAAGAGGCACAAAAGACTCTAGAGGAATCTATGGCCATGTCA ATTGACGAGCGACAAGAGTTGGCTCTGGAGTTGTATCGCTCTCGTCACGG AGTTGGAACTGGTACCTTGAACAGTGTAGGCACTCTGCGAAGCGGTACCT TGGGGACTCTGGGCAGAAAGTCTACCAGTCGACCGCCGCCGGGTGTCCAT CTCGGCAAGAGTCCGCCACGCCCATCGCCCGCTTCGGTGGCGTATCACAG CGACGAGGAGAGCTTGAAGTGCTACGACGAAAATCCAGACGACAGCAGCG TGACCGAGAAGCCCTCGGAGGTCAGCAGCTCGGAGGCATCGCAGCATTCG GAGAGCGAAAACGAGAGCGTGCGCAGCGACCCCCACTCCTTTGTGAATCA CTATGCCAACGTGAATGACTCACTGCGACAGTCGTGGAAGAAGACCAAGC CGGTGCGAAACTACTCCAGCTACACCGATTCGGAGCCGGAGGGCAGTGCA GTGATGAGCCTCAATGGTGGCCAGATTATCGTCAATAATATGGCCAGGTC GAGGGCACCACTGCCCGGCTTCTCGTCATTCGTCTGACAATCAACTGAGT TCTAAGATCTAAGCACCAGTAGCAACGGCACCGTCATCCGCGAGACCTTC GTCTAGGCTGAGAACGAGGAGGGTCCGAAGAAGGAACCCGGAGCTGGGGG GTTGGCTGGGGCCACTCGAACCCGTTGGAGGACGACACACACACCCACAT ATCAGACAGGCCCTCCTGCCCTCAGCCCCTCCACCTTCACGACGATACGC TGCTACAGGGATATACATATTACTTAATACCAGACATTCAGTAAGATTAT CTTGTATGCATTTAGTTTGAGTTCTTAATTATGTGCTTTTTACGTTGGGT TGTGCACTTCCGCGTCTTAACGTTATCCTTTTAACTAAAAATGTTTGTAT GCCCAGTACTTCCCATACTCGTAAAACGTATAAATTTGACCAACAGGCAT TAATTGAAGTAATATTTTTAAATATGCATAACCTAGTGTAAGGAGCACAT TATTTTCAGCGTCAGTTTCCCAGCATGACTCTGCTCCTATTTTATAGTAT TTATTTTTGGATGTACAGTGTGAGTGCGATGCTGCCTGCCACGCCTCCAG ATGTGGCATTTATGGAATAGGGCGCGACAAATCGAATCCGAATCCTGTGA TAAAACGATTTCCTTGTGCCCTAATAAGTTTTTCCAATGATTTCCAAGTG TGTTCAGCGCGTGGCAGGTAGTCTGGTCTTTTAAGTGACTGTGAGTGTGA GTGACGTACGCGCTTCGTCTGCGCAATCTCATTATATATAAAATGACAAA AGGTTATGTTTTATGTTTAGTTTTTTGTGCGAGTAAATCTAGAAAATCTA CAAGTACGAAGACAAGGACAAAACACCGATGCAATCGGTGGCCTAATAAG AAATGAAGAAAACGAGTTCATGAAACACGCGAAAGAAATCATACGCAGTA AACGAAAGTCTTTCTCTTATAAGAAAGGATAAGTGTATTTTTTTGGAAAG GCATCGAAGAAAGGCTATAGCCATGAGCATGAGAAGAATATCTAAGAAAG ATGGCTTAGGTAATATTGATAGGCCATATTATTGCAATTTCCCTACCACA TAAGTTCACAAACGCAAGCAAAAGTAACACAAAGCAAACAAACAAACAAA CGAGCAAACATGCAAGCATTCAAAAGCTGCATAGCACACAAACAATCGAA GAATCGATTCGTTCAGAGCGCATGCGTAGCAGATTTAGCATTAAGTACGA TCTTCTAGAGGTAAGATGCATTTTTTTTTTGTTAGTTGGGGGCCAGTCTC TACGGGGAGACTTTGCCCTGATACTCTAGATCGTAATTTTCGATTGTTTA ATCCCCGAAGCTTAGAGATAATTGTACTCGTGTTTGTATTTGAATGCGGT TTATATTTATGACTATATTTATATATCGATGTATACATGTATATCTAAAA ACTTAAACGACTGATTATATATTTTCCCCTGATTAGTTGTATACTTAACT CCTTTTTTGTAATACCTATGCATTAACTATGCTAAGACCACTTTGGCACT TTGGCGACCGTTGAAATGAAAACGGAGTGGATAACTTTCTGCGTTTTCCC CAAATCGCAAGCTAATTTCAACTTCAAAGACTCAAAGCACAAGTTCATCT AGTTAAGTAAATGTATTTGTAATTGTTGAATTGATGATTAAAGGATAGTT CTCCACTAATTGAGGAGGCACGTTTGATGTGGAGGAACTATGGAGATGAA AAAGGTGGAGCTTAGGGATCTTCGCTCGTTGCTAGTTGAAATTCGTGCAA CAAGCGCAAAGTATTAAAATATTGATAAATACAATTTAAATGTGTAAATG TAATTGATCGAGCATCCGAATATGAATCAATAAAAGAACATGAAATCAAT GGAA
Other Products of this Gene
Other Transcripts
	Name FlyBase ID Length (nt) sdk-RA FBtr0070133 8839 sdk-RC FBtr0070131 8980 sdk-RD FBtr0070130 8956
Polypeptides
Derived from THIS transcript	Name FlyBase ID Length (aa) sdk-PB FBpp0070127 2224
Derived from OTHER transcripts	Name FlyBase ID Length (aa) sdk-PA FBpp0070128 2224 sdk-PC FBpp0070126 2232 sdk-PD FBpp0070125 2224
Comments
	CDS edit: sequencing error
External Crossreferences
	RefSeq - An integrated, non-redundant set of sequences • NM_134314
Synonyms
	CG5227-RB CG5227-RD sdk-RB sdk-RD
References ( 3 )
Research paper	Nguyen et al., 1997, Development 124(17): 3303--3312 The sidekick gene, a member of the immunoglobulin superfamily, is required for pattern formation in the Drosophila eye. [FBrf0098319]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]