A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Dmel\P{lacW}RhoGAP71Es1629a Insertion

General Information
Symbol Dmel\P{lacW}RhoGAP71Es1629a Species D. melanogaster
Name FlyBase ID FBti0017042
Feature type transposable_element_insertion_site Created / Updated 2001-02-13/2006-05-15
Description
Inserted element P{lacW} Localized function
Affected gene(s) RhoGAP71E Expression data
Causes allele(s) RhoGAP71Es1629a Viability / fertility
LINE ID Stock availability
Genomic Location
Chromosomal location 3L ( 71E1 ) Sequence location 3L:15,582,004..15,582,004 [+]
Map ( GBrowse ) detailed view FBti0007856 FBti0034922 FBti0027089 FBti0072442 FBti0011698 FBti0046990 FBti0037837 FBti0036667 FBti0034926 FBti0034816 FBti0004988 FBti0017042 FBti0036607 FBti0036674 FBti0029902 FBti0048450 FBti0050290 FBti0046365 FBti0011609
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3L:15,582,004..15,582,004 [+]
(FlyBase, 2005)
Orientation
Cytological location
(computed by FlyBase)
71E1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
Chromosome in situ
hide Sequence Data
Flanking sequence
AQ026377
(BDGP Project Members, 1994-1999, FlyBase, 1992-)
hide Inserted Element
Construct P{lacW}
Location-dependent
role 		 
Size 10.691Kb
Associated alleles
w+mC
Ecol\lacZP\T.W
Molecular map
Transposon class
Element type
hide Affected Gene(s)
Insertion within gene
Insertion may
affect gene
RhoGAP71E
(FlyBase, 1996-)
Orientation
(relative to gene)
Gene
Orientation
References
 
 
 
hide Alleles and Phenotypes
Causes alleles
RhoGAP71Es1629a
(FlyBase, 1996-)
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
hide Expression Data
Reporter Expression
Stage
Tissue/Position
Reference
Additional Information
Statement
Reference
Assay mode
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
12100
w1118; P{lacW}RhoGAP71Es1629a, l(3)s1629bs1629b/TM3, Sb1
hide Linkouts
hide Comments
Location 3L:15554162-15554163 determined by FlyBase alignment of dbGSS accession AQ026377 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation revised.
(FlyBase, 2005)
Original line may carry multiple insertions. Existence of P{lacW}s1629a based upon flanking sequence data, which conflicts with localization of P{lacW}l(3)s1629bs1629b by in situ hybridization.
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{lacW}RhoGAP71Es1629a
(FlyBase, 1992-)
P{lacW}s1629a
(BDGP Project Members, 2000-, FlyBase, 2005, FlyBase, 1992-)
Secondary FlyBase IDs
    hide References ( 6 )
    Research paper
    Spradling et al., 1999, Genetics 153(1): 135--177
    The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
    FlyBase analysis
    FlyBase, 2005, Assessment of transgenic construct insertion sites.
    Assessment of transgenic construct insertion sites. [FBrf0184339]
    FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
    FlyBase inference based on genome sequence analysis. [FBrf0104946]
    FlyBase, 1992-, FlyBase curation
    FlyBase curation. [FBrf0105495]
    Computer file
    BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
    Berkeley Drosophila Genome Project. [FBrf0125078]
    BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
    Berkeley Drosophila Genome Project. [FBrf0067338]