Dsub\bilbo

General Information
Symbol	Dsub\bilbo	Species	D.subobscura
Name		FlyBase ID	FBte0000039
Feature type	natural transposable element	Created / Updated	2006-12-04/2006-12-04
Sequences & Components
Complete element (bp)
Terminal repeat (bp)
Reference sequence	transposon_sequence_set.embl.txt.gz
Component genes	Dsub\bilbo\ORF
Sequence Accessions
	DDBJ/EMBL/GenBank U73803 U73801 U73800 AF034276 AF034275 AF034274 AF034273 AF034272 AF034271 AF034270 AF034269 AF034268 AF034267
Sequence Ontology (SO)
Transposon type	non_LTR_retrotransposon (Blesa and Martinez-Sebastian, 1997) transposable_element (Blesa and Martinez-Sebastian, 1997)
Insertions & Copy Number
Copy number and comments
Search for	All insertions of this transposon Insertions in the sequenced genome Insertions in other genomes
Target Site Duplication
Size (bp)
Orthologs
Curated drosophilid orthologs	Dpiv\bilbo (Blesa et al., 2001) Dpse\bilbo (Blesa et al., 2001) Dmel\bilbo (Blesa et al., 2001) Dyak\bilbo (Blesa et al., 2001) Dtol\bilbo (Blesa et al., 2001) Dtak\bilbo (Blesa et al., 2001) Dste\bilbo (Blesa et al., 2001) Dsim\bilbo (Blesa et al., 2001) Dser\bilbo (Blesa et al., 2001) Dseg\bilbo (Blesa et al., 2001) Draj\bilbo (Blesa et al., 2001) Dper\bilbo (Blesa et al., 2001) Dpap\bilbo (Blesa et al., 2001) Dnik\bilbo (Blesa et al., 2001) Dnar\bilbo (Blesa et al., 2001) Dnan\bilbo (Blesa et al., 2001) Dmim\bilbo (Blesa et al., 2001) Dmad\bilbo (Blesa et al., 2001) Dleb\bilbo (Blesa et al., 2001) Dlat\bilbo (Blesa et al., 2001) Dimm\bilbo (Blesa et al., 2001) Dgua\bilbo (Blesa et al., 2001) Dgau\bilbo (Blesa et al., 2001) Dfun\bilbo (Blesa et al., 2001) Dfic\bilbo (Blesa et al., 2001) Ddim\bilbo (Blesa et al., 2001) Dcan\bilbo (Blesa et al., 2001) Dbuz\bilbo (Blesa et al., 2001) Dbus\bilbo (Blesa et al., 2001) Dboc\bilbo (Blesa et al., 2001) Daur\bilbo (Blesa et al., 2001) Dath\bilbo (Blesa et al., 2001) Dara\bilbo (Blesa et al., 2001) Dana\bilbo (Blesa et al., 2001) Damb\bilbo (Blesa et al., 2001) Dafs\bilbo (Blesa et al., 2001) Dpsb\bilbo Dobs\bilbo Dmir\bilbo Dbif\bilbo Dazt\bilbo Dalg\bilbo
Comments

Other Information
Etymology

External Crossreferences
Sequence Crossreferences
	DDBJ/EMBL/GenBank U73803 U73801 U73800 AF034276 AF034275 AF034274 AF034273 AF034272 AF034271 AF034270 AF034269 AF034268 AF034267
Other Crossreferences

Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	bilbo1 (Blesa, 1996.10.4, Blesa, 1996.10.4) Dsub\bilbo
Name Synonym	bilbo (Blesa and Martinez-Sebastian, 1997)
Secondary FlyBase IDs
	FBgn0023239
References ( 8 )
Research paper	Blesa et al., 2001, Molec. Biol. Evol. 18(4): 585--592 Distribution of the bilbo Non-LTR Retrotransposon in Drosophilidae and its Evolution in the Drosophila obscura Species Group. [FBrf0134760] Berezikov et al., 2000, GenomeBiol. 1(6): RESEARCH0011.1--0011.15 A search for reverse transcriptase-coding sequences reveals new non-LTR retrotransposons in the genome of Drosophila melanogaster. [FBrf0134666] Biemont and Cizeron, 1999, Genetica 105(1): 43--62 Distribution of transposable elements in Drosophila species. [FBrf0111330] Losada et al., 1999, Molec. Biol. Evol. 16(10): 1341--1346 The analysis of circe, an LTR retrotransposon of Drosophila melanogaster, suggests that an insertion of non-LTR retrotransposons into LTR elements can create chimeric retroelements. [FBrf0111953] Malik et al., 1999, Molec. Biol. Evol. 16(6): 793--805 The age and evolution of non-LTR retrotransposable elements. [FBrf0108898] Blesa and Martinez-Sebastian, 1997, Molec. Biol. Evol. 14(11): 1145--1153 bilbo, a non-LTR retrotransposon of Drosophila subobscura: a clue to the evolution of LINE-like elements in Drosophila. [FBrf0099127]
DNA/RNA sequence record	Blesa, 1996.10.4, GenBank/EMBL/DDBJ: U73803 Drosophila subobscura unknown protein, reverse transcriptase and putative reverse transcriptase genes, partial cds. [FBrf0113341] Blesa, 1996.10.4, GenBank/EMBL/DDBJ: U73801 Drosophila subobscura transposable element bilbo1 target site region. [FBrf0113339]