A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\Mbs

General Information
SymbolDmel\MbsSpeciesD. melanogaster
NameMyosin binding subunitAnnotation symbolCG32156
Feature typeprotein_coding_geneFlyBase IDFBgn0005536
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)3LRecombination map
Cytogenetic map72D1-72D1Sequence location3L:16,045,068..16,075,130 [+]
Map ( GBrowse ) detailed view
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Automatically generated summary

See sections below for more information
The gene Myosin binding subunit is referred to in FlyBase by the symbol Mbs (CG32156, FBgn0005536). It has the cytological map location 72D1. Its sequence location is 3L:16045068..16075130. Its molecular function is described as: myosin phosphatase activity; myosin binding. It is involved in the biological processes: dorsal closure; regulation of compound eye photoreceptor development; imaginal disc-derived wing hair organization and biogenesis; oogenesis; epidermis development. 35 alleles are reported. The phenotypes of these alleles are annotated with 12 unique terms, many of which group under: organ system; anatomical structure; adult segment; portion of tissue; integumentary system; adult mesothoracic segment; adult; egg; wing hair; imaginal precursor; peripheral nervous system. It has 6 annotated transcripts and 6 annotated polypeptides.

External Summaries
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
72D1-72D1  
Limits computationally determined from genome sequence between P{lacW}thj5C8&P{PZ}Mbs03802 and P{lacW}SsRβs1939  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
72D1-72D2
(determined by in situ hybridisation)  
72C-72C
(determined by in situ hybridisation)  
72C-72C
(determined by in situ hybridisation)  
72D1-72D2
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\Mbs for information on other features
detailed view FBtr0075499 FBtr0075438 FBtr0075439 FBtr0112852 FBtr0112851 FBtr0112850 FBtr0075441 FBtr0075442 FBpp0075197 FBpp0111764 FBpp0111765 FBpp0075196 FBpp0075199 FBpp0111763 FBpp0099782 FBti0025153 FBti0068743 FBti0100101 FBti0011805 FBti0033411 FBti0033410 FBti0035996 FBti0046016 FBti0052244 FBti0005488 FBti0066252 FBti0037659 FBti0045217
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0075439
  4951
  1102
FBtr0075438
  5100
  1145
FBtr0075441
  1925
  377
FBtr0112850
  2405
  367
FBtr0112851
  3775
  795
FBtr0112852
  4161
  925
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Mbs-PA  
FBpp0075197  
119.3  
1102  
5.41  
Mbs-PC  
FBpp0075196  
123.7  
1145  
5.54  
Mbs-PE  
FBpp0075199  
40.3  
377  
10.55  
Mbs-PF  
FBpp0111763  
39.3  
367  
10.35  
Mbs-PG  
FBpp0111764  
87.3  
795  
6.39  
Mbs-PH  
FBpp0111765  
101.2  
925  
7.05  
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Ankyrin (IPR002110)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
    Maps to
    Does NOT map to
    Identified with
    hide Mapped Features & Mutations
    Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
    Type
    Symbol & Location
    Additional Notes
    References
    point mutation
    comment=G to A nucleotide change at the second or third position of the Trp codon leads to a nonsense mutation. (exact site of mutation unspecified). Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
    evidence=experimental
    reported_pr_change=W22@
    point mutation
    comment=Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change. position of mutation on reference sequence inferred by FlyBase curator based on author statement.
    evidence=experimental
    na_change=C16055751T
    pr_change=Q238|Mbs-PC,Q238|Mbs-PA,Q238|Mbs-PG,Q238|M bs-PH
    reported_pr_change=Q239@
    point mutation
    comment=G to A nucleotide change at the second or third position of the Trp codon leads to a nonsense mutation. (exact site of mutation unspecified). Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
    evidence=experimental
    reported_pr_change=W243@
    hide External Data
    Linkouts
    DEDB - Drosophila exon database: splicing graphs
    Crossreferences
    hide Expression Data
    FlyBase-Curated Data
    Transcript and
    Protein data
    Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
    hide Summary of Transcript Expression
    Stage
    Tissue/Position
    Reference
    Marker for
      Subcellular Localization
      CV Term
      hide Summary of Polypeptide Expression
      Stage
      Tissue/Position
      Reference
      Marker for
        Subcellular Localization
        CV Term
        hide Microarray Data
        Developmental timecourse, Costello et al., 2008 (Original data from Arbeitman et al., 2002)
        Untitled Document detailed view FBtr0075499 FBtr0075438 FBtr0075439 FBtr0112852 FBtr0112851 FBtr0112850 FBtr0075441 FBtr0075442
        hide External Data & Images
        Linkouts
        FLIGHT - Cell culture data for RNAi and other high-throughput technologies
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies
        FlyExpress - Embryonic expression images (BDGP data)
        hide Alleles & Phenotypes
        hide Summary of Allele Phenotypes
        Lethality
        Allele
        Other Phenotypes
        Allele
        Sterility
        Allele
        Phenotype manifest in
        Allele