Gene Dmel\CG14710

Help

Close All Open All

General Information

Symbol

Dmel\CG14710

Species

D. melanogaster

Name

CG14710

Annotation symbol

CG14710

Feature type

protein_coding_gene

FlyBase ID

FBgn0037920

Created / Updated

2003-12-01/2008-04-22

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

86E13-86E13

Sequence location

3R:7,445,814..7,447,446 [+]

Map ( GBrowse )

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol CG14710 (FBgn0037920). It has the cytological map location 86E13. Its sequence location is 3R:7445814..7447446. Its molecular function is described as: nucleic acid binding; zinc ion binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

86E13-86E13

Limits computationally determined from genome sequence between P{PZ}tho¹&P{PZ}l(3)04629⁰⁵²⁷⁵ and P{EP}Lk6^EP886

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Molecular Map Data

Gene Order (in direction of increasing cytology)

References

Gene Order (overall orientation not stated)

References

Gene Model & Products

Please see the GBrowse view of Dmel\CG14710 for information on other features

Comments on Gene Model

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

CG14710-RB

FBtr0299566

1452

415

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kD)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

CG14710-PB

FBpp0288841

48.5

415

5.48

Additional Polypeptide Data & Comments

Reported size (kD)

Comments

External Data

Linkouts

PANTHER - Protein classification by function, families, and pathways

•

FBgn0037920

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Zinc finger, C2H2-type (IPR007087)

Zinc finger, AD-type (IPR012934)

Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087)

Zinc finger, C2H2-like (IPR015880)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Q95RA7

Maps to

Does NOT map to

Identified with

LD47721

(BDGP Project Members, 2000-)

Mapped Features & Mutations

Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

DEDB - Drosophila exon database: splicing graphs

•

9043

Crossreferences

Expression Data

FlyBase-Curated Data

Transcript and
Protein data

Please see the FlyBase Gene Expression Report for details of gene expression from the literature.

Summary of Transcript Expression

Stage

Tissue/Position

Reference

Marker for

Subcellular Localization

CV Term

Summary of Polypeptide Expression

Stage

Tissue/Position

Reference

Marker for

Subcellular Localization

CV Term

Microarray Data

Developmental timecourse, Costello et al., 2008 (Original data from Arbeitman et al., 2002)

Untitled Document detailed view

AI546206

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0037920

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

FBgn0037920

GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies

•

FBgn0037920

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

viable

CG14710^f06000

Sterility

Allele

fertile

CG14710^f06000

Phenotype manifest in

Allele

Classical Alleles ( 1 )

For All Classical Alleles Show

Allele of CG14710	Class	Mutagen	Stocks	Known lesion
CG14710^f06000		piggyBac transposase	2	--

Alleles Carried on Transgenic Constructs ( 1 )

For All Alleles Carried on Transgenic Constructs Show

Allele of CG14710	Class	Mutagen	Stocks	Known lesion
CG14710^GD8416		in vitro construct \| RNAi in vitro construct \| regulatory fusion	3	Yes

Aneuploid Aberrations

Useful deficiency

Df(3R)M-Kx1

Useful duplication

Dp(3;3)M86D⁺2

Disrupted in

Df(3R)Exel6161

(Ryder, 2004.4.26)

Df(3R)Exel6276

(Ryder, 2004.4.26)

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

P{GD8416}

Insertions

Type of insertions

Name

Expression data

miscellaneous insertions

PBac{WH}CG14710^f06000

Related Comments

Please look at the allele reports for the complete phenotype data

Gene Ontology: Function, Process & Cellular Component ( 3 )

Molecular Function

CV term

Evidence

References

nucleic acid binding

inferred from sequence or structural similarity with UniProtKB:Q61898

(FlyBase, 1992-)

zinc ion binding

inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR012934, InterPro:IPR015880

(FlyBase Curators et al., 2004-)

Biological Process

CV term

Evidence

References

Cellular Component

CV term

Evidence

References

nucleus

inferred from electronic annotation with InterPro:IPR012934

(FlyBase Curators et al., 2004-)

Sequence Ontology: Class of Gene

protein_coding_gene

nuclear_gene

Interactions & Pathways

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

CG14710 allele

Gene

References

External Data

Linkouts

BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions

•

66521

Orthologs

Genome-wide drosophilid orthologs

Dana\GF18381

Dere\GG18266

Dgri\GH18110

Dmoj\GI24611

Dper\GL22111

Dpse\GA13192

Dsec\GM23957

Dsim\GD18767

Dvir\GJ22561

Dwil\GK22769

Dyak\GE24184

Curated drosophilid orthologs

Dpse\GA13192

Linkouts

Functional Complementation between Species

Inter-Species Misexpression Data

Produces phenotype in

Produces NO phenotype in

Stocks & Reagents

Stocks Listed in FlyBase ( 5 )

Harvard

PBac{WH}CG14710^f06000

VDRC

v18341

w¹¹¹⁸; P{GD8416}v18341

v18343

w¹¹¹⁸; P{GD8416}v18343

v39701

w¹¹¹⁸; P{GD8416}v39701

Bloomington

18930

w¹¹¹⁸; PBac{WH}CG14710^f06000

Genomic Clones ( 1 )

BACR24C01

cDNA Clones ( 12 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones

LD47721

Other clones

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi & Array Information

Affy Oligo

Linkouts

DRSC - RNAi screening (Harvard): high-throughput cell culture data and design

•

FBgn0037920

GenomeRNAi - RNAi phenotypes (Heidelberg): high-throughput cell culture data

•

FBgn0037920

Antibody Information

Other Information

Discoverer

Etymology

Identification

Position Effect Variegation Data

Relationship to Other Genes

Source for database identity of

Source for database merge of

Additional comments

Comments About Role

Comments About Molecular Function

Other Comments

External Crossreferences & Linkouts

Sequence Crossreferences

DDBJ / EMBL / GenBank

•

UniProtKB/TrEMBL

•

Q95RA7

Other Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Zinc finger, C2H2-type (IPR007087)

Zinc finger, AD-type (IPR012934)

Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087)

Zinc finger, C2H2-like (IPR015880)

Linkouts

BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions

•

66521

DEDB - Drosophila exon database: splicing graphs

•

9043

DRSC - RNAi screening (Harvard): high-throughput cell culture data and design

•

FBgn0037920

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0037920

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

FBgn0037920

FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans

•

FBgn0037920

GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies

•

FBgn0037920

GenomeRNAi - RNAi phenotypes (Heidelberg): high-throughput cell culture data

•

FBgn0037920

PANTHER - Protein classification by function, families, and pathways

•

FBgn0037920

Synonyms & Secondary IDs ( 1 )

Reported As

Symbol Synonym

CG14710

Name Synonym

CG14710

Secondary FlyBase IDs

References ( 12 )

Research paper

Brody et al., 2002, Mech. Dev. 113(1): 41--59: Identification of novel Drosophila neural precursor genes using a differential embryonic head cDNA screen. [FBrf0147137]

Personal communication to FlyBase

Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center: RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.: Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.: Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
Ryder, 2004.4.26, Exelixis CG deletion data.: Exelixis CG deletion data. [FBrf0184335]

FlyBase analysis

FlyBase, 2005, Assessment of transgenic construct insertion sites within genes.: Assessment of transgenic construct insertion sites within genes. [FBrf0184341]
FlyBase, 1992-, FlyBase curation: FlyBase curation. [FBrf0105495]

Computer file

Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.: Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]: [title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.: Berkeley Drosophila Genome Project. [FBrf0125078]

Automatic genome annotation

FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.]: [Annotations performed at the Celera Jamboreee.] [FBrf0126705]

Curated genome annotation

Lei, 1999.11, [Annotations performed at the Celera Jamboreee.]: [Annotations performed at the Celera Jamboreee.] [FBrf0126680]