A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\Ubc-E2H

General Information
SymbolDmel\Ubc-E2HSpeciesD. melanogaster
NameUbc-E2HAnnotation symbolCG2257
Feature typeprotein_coding_geneFlyBase IDFBgn0029996
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)XRecombination map
Cytogenetic map7D6-7D6Sequence locationX:7,982,035..7,988,097 [-]
Map ( GBrowse ) detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Ubc-E2H (CG2257, FBgn0029996). It has the cytological map location 7D6. Its sequence location is X:7982035..7988097. Its molecular function is described as ubiquitin-protein ligase activity. It is involved in the biological processes: regulation of protein metabolic process; post-translational protein modification. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides.

hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
7D6-7D6  
Limits computationally determined from genome sequence between P{EP}snEP1217 and P{EP}Ubc-E2HEP1303  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\Ubc-E2H for information on other features
detailed view FBtr0071114 FBtr0071113 FBtr0071112 FBpp0071069 FBpp0071067 FBpp0071068 FBti0054989 FBti0053485 FBti0059184 FBti0056718 FBti0011846 FBti0048197
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Ubc-E2H-RA
FBtr0071112
 NM_167145
  2436
  183
Ubc-E2H-RB
FBtr0071114
 NM_132210
  2278
  183
Ubc-E2H-RC
FBtr0071113
 NM_167146
  2332
  183
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Ubc-E2H-PA  
FBpp0071067  
20.9  
183  
4.41  
  NP_727233
  AAF46319
Ubc-E2H-PB  
FBpp0071069  
20.9  
183  
4.41  
  NP_572438
  AAF46318
Ubc-E2H-PC  
FBpp0071068  
20.9  
183  
4.41  
  NP_727234
  AAN09227
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
•
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
•
Ubiquitin-conjugating enzyme, E2 (IPR000608)
Ubiquitin-conjugating enzyme (IPR015581)
Ubiquitin-conjugating enzyme/RWD-like (IPR016135)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
AA201390
 
AA202788
 
AA203018
 
AA246689
 
AA246947
 
AA263444
 
AA263847
 
AA391098
 
AA391215
 
AA391334
 
AA391407
 
AA440010
 
AA441330
 
AA536410
 
AA539125
 
AA539175
 
AA539697
 
AA540415
 
AA540448
 
AA735286
 
AA735305
 
AA816310
 
AE003442
AAF46318
 
AE003442
AAF46319
 
AE003442
AAN09227
 
AI062496
 
AI257874
 
AI515874
 
AQ073175
 
AW942285
 
AW942464
 
AY061237
AAL28785
 
AY118510
AAM49879
 
BI164552
 
BI166914
 
BI167208
 
BI168176
 
BI168711
 
BI168796
 
BI171208
 
BI172741
 
BI212740
 
BI213182
 
BI213888
 
BI214690
 
BI216107
 
BI216149
 
BI216163
 
BI216736
 
BI229478
 
BI229673
 
BI229987
 
BI230029
 
BI232047
 
BI233008
 
BI235957
 
BI239234
 
BI363023
 
BI363235
 
BI363447
 
BI363589
 
BI363768
 
BI364339
 
BI364467
 
BI365137
 
BI365335
 
BI365924
 
BI366654
 
BI367807
 
BI369190
 
BI369198
 
BI369646
 
BI370067
 
BI370155
 
BI370156
 
BI370361
 
BI371301
 
BI372906
 
BI373803
 
BI373887
 
BI374713
 
BI375227
 
BI375767
 
BI375817
 
BI482194
 
BI483566
 
BI484670
 
BI484696
 
BI484757
 
BI485830
 
BI486305
 
BI486763
 
BI577559
 
BI578365
 
BI579304
 
BI579401
 
BI579589
 
BI588735
 
BI607110
 
BI607340
 
BI622209
 
BI623112
 
BI634696
 
BQ103712
 
CO188310
 
CO191070
 
CO192020
 
CO262970
 
CO264831
 
CO269151
 
CO272688
 
CO272706
 
CO272884
 
CO273590
 
CO273630
 
CO274750
 
CO275368
 
CO275790
 
CO277412
 
CO278303
 
CO278319
 
CO281276
 
CO290341
 
CO290769
 
CO294620
 
CO299786
 
CO302470
 
CO312140
 
CO314614
 
CO317483
 
CO320352
 
CO323550
 
CO330303
 
CO345483
 
CZ476395
 
CZ490155
 
DQ138710
ABA86316
 
EC059341
 
EC060969
 
EC061403
 
EC066730
 
EC070674
 
EC070675
 
EC072364
 
EC073252
 
EC078668
 
EC082219
 
EC083316
 
EC083558
 
EC084055
 
EC087231
 
EC087531
 
EC195632
 
EC197491
 
EC198053
 
EC198058
 
EC201212
 
EC204601
 
EC207054
 
EC209259
 
EC209492
 
EC211993
 
EC213583
 
EC213605
 
EC216294
 
EC219201
 
EC221007
 
EC221535
 
EC225858
 
EC228017
 
EC231682
 
EC236586
 
EC237182
 
EC237543
 
EC237968
 
EC238765
 
EC241034
 
EC242325
 
EC243263
 
EC244440
 
EC245936
 
EC249946
 
EC259770
 
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
    Maps to
    Does NOT map to
    Identified with
    (BDGP Project Members, 2000-)
    hide Mapped Features & Mutations
    Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
    Type
    Symbol & Location
    Additional Notes
    References
    hide External Data
    Linkouts
    DEDB - Drosophila exon database: splicing graphs
    •
    Crossreferences
    hide Expression Data
    FlyBase-Curated Data
    Transcript and
    Protein data     		Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
    hide Summary of Transcript Expression
    Stage
    Tissue/Position
    Reference
    Marker for
      Subcellular Localization
      CV Term
      hide Summary of Polypeptide Expression
      Stage
      Tissue/Position
      Reference
      Marker for
        Subcellular Localization
        CV Term
        hide External Data & Images
        Linkouts
        FLIGHT - Cell culture data for RNAi and other high-throughput technologies
        •
        GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies
        •
        hide Alleles & Phenotypes
        hide Summary of Allele Phenotypes
        Lethality
        Allele
        lethal | recessive
        Phenotype manifest in
        Allele
        hide Classical Alleles ( 4 )
        For All Classical Alleles Show

        Allele of Ubc-E2HClassMutagenStocksKnown lesion
        Ubc-E2HEP13032 Yes
        Ubc-E2HPG1650 --
        Ubc-E2Hd087561 --
        Ubc-E2Hf073451 --
        hide Alleles Carried on Transgenic Constructs ( 1 )
        For All Alleles Carried on Transgenic Constructs Show

        Allele of Ubc-E2HClassMutagenStocksKnown lesion
        Ubc-E2HGD97652 Yes
        hide Aneuploid Aberrations
        Useful deficiency
         
        Useful duplication
         
        hide Transgenic Constructs & Insertions
        Transgenic Constructs
        Type of construct
        Name
        Expression data
        UAS construct
        P{GD9765}
        NA
        Insertions
        Type of insertions
        Name
        Expression data
        miscellaneous insertions
        PBac{WH}Ubc-E2Hf07345
        NA
        insertion of enhancer trap binary system
        P{GawB}Ubc-E2HPG165
        No
        insertion of mobile activating element
        P{EP}Ubc-E2HEP1303
        NA
        P{XP}Ubc-E2Hd08756
        NA
        hide Related Comments
        Please look at the allele reports for the complete phenotype data
        hide Gene Ontology: Function, Process & Cellular Compon