Gene Dmel\Gasp

General Information
Symbol	Dmel\Gasp	Species	D. melanogaster
Name	Gasp	Annotation symbol	CG10287
Feature type	protein_coding_gene	FlyBase ID	FBgn0026077
Created / Updated	2003-12-01/2007-03-20
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	83D4-83D4	Sequence location	3R:1,914,951..1,926,609 [-]
Map ( GBrowse )
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Gasp (CG10287, FBgn0026077). It has the cytological map location 83D4. Its sequence location is 3R:1914951..1926609. Its molecular function is described as: chitin binding; structural constituent of peritrophic membrane. It is involved in the biological process chitin metabolic process. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 83D4-83D4 Limits computationally determined from genome sequence between P{lacW}cas^j1C2 and P{PZ}lab⁰¹²⁴¹
Experimentally Determined Cytological Location
Cytogenetic map Notes References 83E1-83E2 (Barry, 1998.6.5)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology) References Gene Order (overall orientation not stated) References
Gene Model & Products
Please see the GBrowse view of Dmel\Gasp for information on other features
Comments on Gene Model
	<new comment>There is a one base deletion in GB:070734 relative to the reference sequence. This leads to a frameshift and a CDS that is shorter by 40 amino acids than that predicted by the reference sequence and a full length Berkeley cDNA.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Gasp-RA FBtr0078619 NM_141354 1464 258 Gasp-RB FBtr0112922 NM_001104224 1253 235
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kD) Length (aa) Theoretical pI RefSeq ID GenBank protein Gasp-PA FBpp0078268 28.4 258 4.49 NP_649611 AAF51920 Gasp-PB FBpp0111835 26.1 235 4.34 NP_001097694 ABW08608
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts	PANTHER - Protein classification by function, families, and pathways • FBgn0026077
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Chitin binding protein, peritrophin-A (IPR002557)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA246297 AE003600 AAF51920 AF070734 AAD09748 AI257788 AI260892 AI296068 AI467770 AW941577 AY069336 AAL39481 BG639296 BI163164 BI168865 BI365729 BI374336 BI374780 BI567927 BI584723 BI586358 BI587088 BI592562 BI592616 BI607951 BI608271 BI612251 BI627538 BP541884 CO187867 CO196504 CO264235 CO264283 CO264705 CO268233 CO268778 CO273311 CO278655 CO280473 CO280562 CO281679 CO282026 CO307388 CO309788 CO312059 CO313886 CO315195 CO321794 CO323755 CO329026 CO330265 CO332140 CO332564 CO332598 CZ469006 CZ471039 CZ471088 EC059603 EC061760 EC062061 EC068316 EC071939 EC072405 EC072680 EC073004 EC075499 EC087509 EC087765 EC198547 EC199354 EC202772 EC204936 EC207926 EC216642 EC221235 EC222373 EC225022 EC226467 EC228227 EC229153 EC231845 EC233829 EC235148 EC242388 EC244501 EC248839 EC253445 EG974113 ES688490 ES688495 ES688497 ES688499 ES688505 ES688507 ES688510 ES688512 ES688513 ES688516 ES688517 ES688522 ES688526 ES688528 ES688530 ES688533 ES688535 ES688536 ES688542 ES688543 ES688550 ES688555 ES688556 ES688557 ES688560 ES688563 ES688564 ES688566 ES688567 ES688570 ES688572 ES688576 ES688577 ES688578 ES688579 ES688581 ES688585 ES688586 ES688587 ES688589 ES688590 ES688599 ES688601 ES688602 ES688606 ES688611 ES688612 ES688613 ES688615 ES688622 ES688624 ES688625 ES688626 ES688628 ES688630 ES688633 ES688636 ES688637 ES688638 ES688649 ES688651 ES688652 ES688653 ES688660 ES688661 ES688663 ES688667 ES688669 ES688672 ES688673 ES688674 ES688676 ES688678 ES688679 ES688680 ES688684 ES688690 ES688691 ES688692 ES688694 ES688697 ES688699 ES688700 ES688701 ES688702 ES688707 ES688709 ES688711 ES688712 ES688713 ES688714 ES688715 ES688719 ES688721 ES688724 ES688728 ES688732 ES688738 ES688741 ES688747 ES688748 ES689034 ES689151 ES689167 ES689194 ES689206 ES689208 ES689209 ES689214 ES689226 ES689232 ES689233 ES689234 ES689235 ES689236 ES689237 ES689241 ES689242 ES689245 ES689248 ES689263 ES689264 ES689265 ES689267 ES689272 ES689273 ES689274 ES689276 ES689283 ES689285 ES689286 ES689287 ES689293 ES689296 ES689298 ES689299 ES689302 ES689307 ES689310 ES689312 ES689314 ES689316 ES689320 ES689321 ES689325 ES689326 ES689328 ES689329 ES689330 ES689332 ES689343 ES689344