Gene Dmel\Ubc14B

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General Information

Symbol

Dmel\Ubc14B

Species

D. melanogaster

Name

Ubiquitin conjugating enzyme 14B

Annotation symbol

Feature type

gene

FlyBase ID

FBgn0019917

Created / Updated

2006-08-22/2006-08-22

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

14C1-14C1

Sequence location

Summary Information

Automatically generated summary

See sections below for more information

The gene Ubiquitin conjugating enzyme 14B is referred to in FlyBase by the symbol Ubc14B (FBgn0019917). It has the cytological map location 14C1. It has not been localized to the genome sequence. Its molecular function is described as ubiquitin-protein ligase activity. It is involved in the biological process ubiquitin cycle. No alleles are reported. It has no annotated transcripts.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

14C1-14C1

Left limit from molecular mapping relative to nonA (FBrf0051450) Right limit from molecular mapping relative to Cyp1 (FBrf0083559)

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

(Rutherford, 1995)

Left of (cM)

Right of (cM)

Notes

Molecular Map Data

Gene Order (in direction of increasing cytology)

References

In direction of increasing cytology: anon-14Bc? eas+ anon-14Bd+ anon-14Be? anon-14Bf? anon-14Bg? Cyp1- Gp14B- Calp14B+ Ubc14B? Hmg14B+ nonA+

(Rutherford, 1995)

Gene Order (overall orientation not stated)

References

Gene Model & Products

Comments on Gene Model

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kD)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

Additional Polypeptide Data & Comments

Reported size (kD)

Comments

External Data

Linkouts

Crossreferences

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL

Maps to

Does NOT map to

Identified with

Mapped Features & Mutations

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

FlyBase-Curated Data

Transcript and
Protein data

Please see the FlyBase Gene Expression Report for details of gene expression from the literature.

Summary of Transcript Expression

Stage

Tissue/Position

Reference

Marker for

Subcellular Localization

CV Term

Summary of Polypeptide Expression

Stage

Tissue/Position

Reference

Marker for

Subcellular Localization

CV Term

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0019917

Alleles & Phenotypes

Summary of Allele Phenotypes

Phenotype manifest in

Allele

Classical Alleles ( 0 )

For All Classical Alleles Show

Allele of Ubc14B	Class	Mutagen	Stocks	Known lesion

Alleles Carried on Transgenic Constructs ( 0 )

For All Alleles Carried on Transgenic Constructs Show

Allele of Ubc14B	Class	Mutagen	Stocks	Known lesion

Aneuploid Aberrations

Useful deficiency

Df(1)19

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

Insertions

Type of insertions

Name

Expression data

Related Comments

Please look at the allele reports for the complete phenotype data

Gene Ontology: Function, Process & Cellular Component ( 2 )

Molecular Function

CV term

Evidence

References

ubiquitin-protein ligase activity

non-traceable author statement

(Reynolds and Spielman, 1999)

Biological Process

CV term

Evidence

References

ubiquitin cycle

non-traceable author statement

(Reynolds and Spielman, 1999)

Cellular Component

CV term

Evidence

References

Sequence Ontology: Class of Gene

gene

Interactions & Pathways

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

Ubc14B allele

Gene

References

External Data

Linkouts

Orthologs

Genome-wide drosophilid orthologs

Curated drosophilid orthologs

Linkouts

Functional Complementation between Species

Inter-Species Misexpression Data

Produces phenotype in

Produces NO phenotype in

Stocks & Reagents

Stocks Listed in FlyBase ( 0 )

Genomic Clones ( 0 )

cDNA Clones ( 0 )

cDNA Clones, Fully Sequenced

BDGP DGC clones

Other clones

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi & Array Information

Affy Oligo

Linkouts

Antibody Information

Other Information

Discoverer

Etymology

Identification

Position Effect Variegation Data

Relationship to Other Genes

Source for database identity of

Source for database merge of

Additional comments

Comments About Role

Comments About Molecular Function

Other Comments

External Crossreferences & Linkouts

Sequence Crossreferences

Other Crossreferences

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0019917

FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans

•

FBgn0019917

Synonyms & Secondary IDs ( 3 )

Reported As

Symbol Synonym

ubc

(Rutherford, 1995)

Ubc14B

Name Synonym

Ubiquitin conjugating enzyme 14B

(Rutherford, 1995)

Secondary FlyBase IDs

References ( 3 )

Abstract

Reynolds and Spielman, 1999, A. Dros. Res. Conf. 40: 283C: Characterization of an ubiquitin conjugating enzyme (UBC) gene located at 14B. [FBrf0107155]

FlyBase analysis

FlyBase, 1992-, FlyBase curation: FlyBase curation. [FBrf0105495]

Thesis

Rutherford, 1995, Ph.D. Thesis, University of California at San Diego, CA: xxi + 176pp: The genetic and biochemical characterization of the major cyclophilin isoform in Drosophila melanogaster. [FBrf0083559]