A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\Acp29AB

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General Information
SymbolDmel\Acp29ABSpeciesD. melanogaster
NameAccessory gland-specific peptide 29ABAnnotation symbolCG17797
Feature typeprotein_coding_geneFlyBase IDFBgn0015583
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map29C1-29C1Sequence location2L:8,392,466..8,393,239 [-]
Map ( GBrowse ) detailed view
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Automatically generated summary

See sections below for more information
The gene Accessory gland-specific peptide 29AB is referred to in FlyBase by the symbol Acp29AB (CG17797, FBgn0015583). It has the cytological map location 29C1. Its sequence location is 2L:8392466..8393239. Its molecular function is described as: galactose binding; sugar binding; hormone activity; binding. It is involved in the biological processes: sperm displacement; sperm competition; post-mating behavior. 43 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide.

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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
29C1-29C1  
Limits computationally determined from genome sequence between P{lacW}l(2)k12914k12914&P{lacW}Akap200k07118a and P{lacW}l(2)k03706k03706&P{lacW}Acerk07704  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
29C1-29C5
29A-29B
29A-29B
(determined by in situ hybridisation)  
29B-29B
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
Overall orientation not stated: Peritrophin-15a+ Peritrophin-15b+ lectin-29Ca? Acp29AB?
hide Gene Model & Products
Please see the GBrowse view of Dmel\Acp29AB for information on other features
detailed view FBtr0079717 FBtr0079718 FBtr0079716 FBtr0079715 FBtr0079714 FBpp0079323 FBpp0079322 FBpp0079321 FBpp0079320 FBpp0079319
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0079716
  774
  234
Additional Transcript Data & Comments
Reported size (kB)
0.95 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0079321  
27.2  
234  
7.96  
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
C-type lectin (IPR001304)
C-type lectin-like (IPR016186)
C-type lectin fold (IPR016187)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
    Maps to
    Does NOT map to
    Identified with
    hide Mapped Features & Mutations
    Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
    Type
    Symbol & Location
    Additional Notes
    References
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    Linkouts
    DEDB - Drosophila exon database: splicing graphs
    Crossreferences
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    FlyBase-Curated Data
    Transcript and
    Protein data
    Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
    hide Summary of Transcript Expression
    Stage
    Tissue/Position
    Reference
     adult stage | male
     male accessory gland main cell
     adult stage | male
     male accessory gland
    Marker for
      Subcellular Localization
      CV Term
      hide Summary of Polypeptide Expression
      Stage
      Tissue/Position
      Reference
      Marker for
        Subcellular Localization
        CV Term
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        Linkouts
        FLIGHT - Cell culture data for RNAi and other high-throughput technologies
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies
        hide Alleles & Phenotypes
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        Lethality
        Allele
        Phenotype manifest in
        Allele
        hide Classical Alleles ( 41 )
        For All Classical Alleles Show

        Allele of Acp29ABClassMutagenStocksKnown lesion
        Acp29AB1
          0 --
          Acp29AB2
            0 --
            Acp29ABLa130 --
            Acp29ABLa140 --
            Acp29ABLa150 --
            Acp29ABLa160 --
            Acp29ABLa10 --
            Acp29ABLa210 --
            Acp29ABLa250 --
            Acp29ABLa340 --
            Acp29ABLa350 --
            Acp29ABLa30 --
            Acp29ABLa40 --
            Acp29ABLa50 --
            Acp29ABLa60 --
            Acp29ABLa90 --
            Acp29ABMa130 --
            Acp29ABMa180 --
            Acp29ABMa200 --
            Acp29ABMa210 --
            Acp29ABMa430 --
            Acp29ABMa450 --
            Acp29ABMa480 --
            Acp29ABMa500 --
            Acp29ABMa520 --
            Acp29ABMa50 --
            Acp29ABMa670 --
            Acp29ABMa70 --
            Acp29ABMa80 --
            Acp29ABMo15b0 --
            Acp29ABMo1b0 --
            Acp29ABMo2b0 --
            Acp29ABMo34a0 --
            Acp29ABMo36a0 --
            Acp29ABMo37a0 --
            Acp29ABMo40b0 --
            Acp29ABMo47a0 --
            Acp29ABMo52b0 --
            Acp29ABMo58b0 --
            Acp29ABMo80b0 --
            Acp29ABMo8b0 --
            hide Alleles Carried on Transgenic Constructs ( 2 )
            For All Alleles Carried on Transgenic Constructs Show

            Allele of Acp29ABClassMutagenStocksKnown lesion
            Acp29ABGD53622 Yes
            Acp29ABScer\UAS.cLa0 Yes
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            Useful deficiency
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            Transgenic Constructs
            Type of construct
            Name
            Expression data
            UAS construct
            Insertions
            Type of insertions
            Name
            Expression data
            hide Related Comments
            Please look at the allele reports for the complete phenotype data
            hide Gene Ontology: Function, Process & Cellular Component ( 8 )
            hide Molecular Function
            CV term
            References
            inferred from electronic annotation with InterPro:IPR001304, InterPro:IPR016186, InterPro:IPR016187
            inferred from sequence or structural similarity
            non-traceable author statement
            inferred from sequence or structural similarity
            hide Biological Process
            CV term
            References
            non-traceable author statement
            traceable author statement
            non-traceable author statement
            non-traceable author statement
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            CV term
            References
            non-traceable author statement
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            Interacts with
            Please look at the allele data for full details of the genetic interactions
            Acp29AB allele
            Gene
            References
            hide External Data
            Linkouts
            BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions
            hide Orthologs
            Genome-wide drosophilid orthologs
            Curated drosophilid orthologs
            Linkouts
            hide Functional Complementation between Species
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            Produces phenotype in
            Produces NO phenotype in
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            hide Stocks Listed in FlyBase ( 2 )