A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\Nap1

General Information
SymbolDmel\Nap1SpeciesD. melanogaster
NameNucleosome assembly protein 1Annotation symbolCG5330
Feature typeprotein_coding_geneFlyBase IDFBgn0015268
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map60A9-60A9Sequence location2R:19,792,696..19,794,837 [-]
Map ( GBrowse ) detailed view
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Automatically generated summary

See sections below for more information
The gene Nucleosome assembly protein 1 is referred to in FlyBase by the symbol Nap1 (CG5330, FBgn0015268). It has the cytological map location 60A9. Its sequence location is 2R:19792696..19794837. Its molecular function is described as histone binding. It is involved in the biological processes: nucleosome assembly; regulation of transcription, DNA-dependent. 21 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide.

External Summaries
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
60A9-60A9  
Limits computationally determined from genome sequence between P{lacW}kenk11035&P{EP}CG17658EP730 and P{EP}TalEP489&P{EP}CG3065EP316  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
60A5-60A6
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\Nap1 for information on other features
detailed view FBtr0072134 FBtr0273356 FBtr0072135 FBtr0072219 FBtr0072137 FBtr0072136 FBpp0072043 FBpp0072044 FBpp0271864 FBpp0072128 FBti0039767 FBti0036886 FBti0036839 FBti0029428 FBti0052838 FBti0067431 FBti0045212 FBti0021394 FBti0066819 FBti0066595
Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0072219
  1383
  370
Additional Transcript Data & Comments
Reported size (kB)
1.5 (northern blot)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0072128  
42.8  
370  
4.40  
Additional Polypeptide Data & Comments
Reported size (kD)
370 (aa); 56 (kD observed)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
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DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
    Maps to
    Does NOT map to
    Identified with
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    Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
    Type
    Symbol & Location
    Additional Notes
    References
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