A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\RpL7A

General Information
SymbolDmel\RpL7ASpeciesD. melanogaster
NameRibosomal protein L7AAnnotation symbolCG3314
Feature typeprotein_coding_geneFlyBase IDFBgn0014026
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)XRecombination map1-
Cytogenetic map6B1-6B1Sequence locationX:6,425,047..6,427,318 [-]
Map ( GBrowse ) detailed view
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Automatically generated summary

See sections below for more information
The gene Ribosomal protein L7A is referred to in FlyBase by the symbol RpL7A (CG3314, FBgn0014026). It has the cytological map location 6B1. Its sequence location is X:6425047..6427318. Its molecular function is described as structural constituent of ribosome. It is involved in the biological processes: translation; mitotic spindle elongation; mitotic spindle organization and biogenesis; ribosome biogenesis and assembly. 2 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides.

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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
6B1-6B1  
Limits computationally determined from genome sequence between P{EP}EP1402&P{EP}CG15893EP1634 and P{EP}Ctr1AEP1364&P{EP}EP1445  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
6A-6B
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\RpL7A for information on other features
detailed view FBtr0070913 FBtr0070917 FBtr0070916 FBtr0070915 FBtr0070914 FBpp0070875 FBpp0070877 FBpp0070879 FBpp0070878 FBpp0070876 FBti0041594
Comments on Gene Model
EST data support existence of multiple transcripts
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0070915
  1063
  271
FBtr0070917
  971
  271
FBtr0070916
  1093
  271
Additional Transcript Data & Comments
Reported size (kB)
1.1 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0070877  
30.7  
271  
11.44  
FBpp0070879  
30.7  
271  
11.44  
FBpp0070878  
30.7  
271  
11.44  
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name