HomeGene Dmel\Pdh
| General Information | |||
|---|---|---|---|
| Symbol | Dmel\Pdh | Species | D. melanogaster |
| Name | Photoreceptor dehydrogenase | Annotation symbol | CG4899 |
| Feature type | protein_coding_gene | FlyBase ID | FBgn0011693 |
| Created / Updated | 2003-12-01/2003-12-01 | ||
| Genomic Location | |||
| Chromosome (arm) | 3L | Recombination map | |
| Cytogenetic map | 72E2-72E2 | Sequence location | 3L:16,346,327..16,347,397 [-] |
| Map ( GBrowse ) | 
| ||
Summary Information
| |||
|
Automatically generated summary
See sections below for more information | The gene Photoreceptor dehydrogenase is referred to in FlyBase by the symbol Pdh (CG4899, FBgn0011693). It has the cytological map location 72E2. Its sequence location is 3L:16346327..16347397. Its molecular function is described as: alcohol dehydrogenase activity; binding. It is involved in the biological processes: phagocytosis, engulfment; metabolic process. 4 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. | ||
|
Detailed Mapping Data
| |||
| FlyBase Computed Cytological Location | |||
Cytogenetic map Evidence for location 72E2-72E2
Limits computationally determined from genome sequence between P{lacW}l(3)s3123s3123 and P{lacW}l(3)j10E8j10E8&P{PZ}l(3)1053210532
| |||
| Experimentally Determined Cytological Location | |||
Cytogenetic map Notes References 72E-72E (determined by in situ hybridisation)
| |||
| Experimentally Determined Recombination Data | |||
| Location | |||
| Left of (cM) | |||
| Right of (cM) | |||
| Notes | |||
| Molecular Map Data | |||
Gene Order (in direction of increasing cytology)
References Gene Order (overall orientation not stated) References | |||
|
Gene Model & Products
| |||
Please see the
GBrowse view of
Dmel\Pdh
for information on other features
| |||
| Comments on Gene Model | |||
|
Transcript Data
| |||
| Annotated Transcripts | |||
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) FBtr0114536
926
261 FBtr0114537
919
260 | |||
| Additional Transcript Data & Comments | |||
| Reported size (kB) | |||
| Comments | |||
| External Data | |||
| Crossreferences | |||
|
Polypeptide Data
| |||
| Annotated Polypeptides | |||
Name FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0113028
28.3
261
9.03
FBpp0113029
28.2
260
8.74
| |||
| Additional Polypeptide Data & Comments | |||
| Reported size (kD) | |||
| Comments | |||
| External Data | |||
| Linkouts | PANTHER
- Protein classification by function, families, and pathways
| ||
| Crossreferences | InterPro
domains - A database of protein families, domains, and functional sites
• Short-chain dehydrogenase/reductase SDR (IPR002198)
Insect alcohol dehydrogenase family (IPR002424)
NAD(P)-binding (IPR016040)
| ||
|
Sequences Consistent with the Gene Model
| |||
| DDBJ
/
EMBL / GenBank | DNA sequence Protein sequence Name | ||