Gene Dmel\RpS4

General Information
Symbol	Dmel\RpS4	Species	D. melanogaster
Name	Ribosomal protein S4	Annotation symbol	CG11276
Feature type	protein_coding_gene	FlyBase ID	FBgn0011284
Created / Updated	2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	69F6-69F6	Sequence location	3L:13,034,856..13,037,012 [+]
Map ( GBrowse )
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein S4 is referred to in FlyBase by the symbol RpS4 (CG11276, FBgn0011284). It has the cytological map location 69F6. Its sequence location is 3L:13034856..13037012. Its molecular function is described as: structural constituent of ribosome; RNA binding. It is involved in the biological processes: translation; mitotic spindle elongation; mitotic spindle organization and biogenesis. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 69F6-69F6 Limits computationally determined from genome sequence between P{lacW}RpS12^s2783 and P{PZ}l(3)04220⁰⁴²²⁰&P{lacW}l(3)j10B6^j10B6
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology) References Gene Order (overall orientation not stated) References
Gene Model & Products
Please see the GBrowse view of Dmel\RpS4 for information on other features
Comments on Gene Model

Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpS4-RA FBtr0075884 NM_168537 983 261 RpS4-RB FBtr0075885 NM_079329 969 261
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kD) Length (aa) Theoretical pI RefSeq ID GenBank protein RpS4-PA FBpp0075618 29.1 261 10.85 NP_729871 AAF49847 RpS4-PB FBpp0075619 29.1 261 10.85 NP_524053 AAF49846
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts	PANTHER - Protein classification by function, families, and pathways • FBgn0011284
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S4e (IPR000876) RNA-binding S4 (IPR002942) KOW (IPR005824) Ribosomal protein S4e, N-terminal (IPR013843) Ribosomal protein S4e, N-terminal and RNA-binding (IPR013844) Ribosomal protein S4e, central (IPR013845)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA141945 AA202188 AA202386 AA263597 AA264007 AA390500 AA390749 AA391014 AA391034 AA391353 AA392199 AA439044 AA439715 AA439787 AA439837 AA538603 AA539510 AA694843 AA695228 AA695418 AA695451 AA695794 AA695957 AA696625 AA696725 AA697026 AA735688 AA802430 AA802432 AA802535 AA802536 AA802815 AA802989 AA803293 AA803654 AA803662 AA803711 AA803800 AA816906 AA817060 AA817157 AA817356 AA817388 AA820451 AA821081 AA821202 AA940827 AA940844 AA941262 AA941808 AA941900 AA941994 AA942259 AA942384 AA942414 AA949393 AA949423 AA950596 AA950652 AA951121 AA951928 AE003539 AAF49846 AE003539 AAF49847 AF083546 AI062326 AI064372 AI064506 AI064558 AI064635 AI107559 AI109878 AI110059 AI134903 AI135140 AI135683 AI237992 AI238280 AI238695 AI256885 AI257380 AI257462 AI257654 AI257989 AI258733 AI259357 AI259744 AI259898 AI260202 AI260282 AI260470 AI293164 AI293193 AI293449 AI294489 AI294820 AI294836 AI295056 AI295287 AI296082 AI296608 AI296649 AI296661 AI297332 AI297924 AI386724 AI387051 AI387340 AI387370 AI388018 AI388304 AI388312 AI388497 AI388986 AI389370 AI402678 AI403548 AI403950 AI404060 AI404114 AI404506 AI405394 AI455638 AI456415 AI456417 AI456641 AI456665 AI511619 AI512122 AI512419 AI512621 AI513370 AI513571 AI514304 AI514355 AI514733 AI515133 AI515252 AI515588 AI515640 AI516031 AI516673 AI516975 AI517167 AI517809 AI518199 AI518786 AI518905 AI519512 AI520089 AI520407 AI532091 AI532533 AI534004 AI534008 AI534058 AI534802 AI542425 AI542987 AX093923 BE978251 BG632477 BG632661 BG635521 BG636174 BG636369 BG636396 BG636409 BG636426 BG636558 BG636654 BG636680 BG636727 BG636888 BG637114 BG637368 BG637466 BG637500 BG639116 BG640088 BG640212 BG640262 BG640683 BG640923 BG641083 BG641171 BG641227 BG641244 BI141813 BI141843 BI142069 BI142194 BI161779 BI161780 BI162402 BI162403 BI164210 BI165374 BI166321 BI166572 BI166975 BI167760 BI167865 BI167966 BI168784 BI168889 BI170532 BI170552 BI170688 BI170920 BI171040 BI171169 BI171209 BI171280 BI171452 BI171483 BI171722 BI172191 BI172203 BI172498 BI172700 BI172800 BI173154 BI173275 BI173513 BI173692 BI212301 BI213116 BI213691 BI214647 BI215100 BI215639 BI215804 BI216593 BI227627 BI227796