Gene Dmel\RpL13

General Information
Symbol	Dmel\RpL13	Species	D. melanogaster
Name	Ribosomal protein L13	Annotation symbol	CG4651
Feature type	protein_coding_gene	FlyBase ID	FBgn0011272
Created / Updated	2005-09-09/2005-09-09
Genomic Location
Chromosome (arm)	2L	Recombination map	2-
Cytogenetic map	30F3-30F3	Sequence location	2L:9,967,312..9,968,495 [+]
Map ( GBrowse )
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein L13 is referred to in FlyBase by the symbol RpL13 (CG4651, FBgn0011272). It has the cytological map location 30F3. Its sequence location is 2L:9967312..9968495. Its molecular function is described as structural constituent of ribosome. It is involved in the biological processes: translation; mitotic spindle elongation; mitotic spindle organization and biogenesis. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 30F3-30F3 Limits computationally determined from genome sequence between P{EP}CG5899^EP701 and P{EP}CG4747^EP594&P{lacW}l(2)k13305^k13305
Experimentally Determined Cytological Location
Cytogenetic map Notes References 29E-29F (Helps, 1994.2.28)
Experimentally Determined Recombination Data
Location	2-
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology) References Gene Order (overall orientation not stated) References Overall orientation not stated: RpL13- Dref+ (Kwon et al., 2003)
Gene Model & Products
Please see the GBrowse view of Dmel\RpL13 for information on other features
Comments on Gene Model

Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpL13-RA FBtr0079888 NM_078806 796 218 RpL13-RB FBtr0100164 NM_001038802 778 218
Additional Transcript Data & Comments
Reported size (kB)	0.95 (northern blot) (Helps et al., 1995)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kD) Length (aa) Theoretical pI RefSeq ID GenBank protein RpL13-PA FBpp0079484 25.0 218 11.64 NP_523530 AAF52842 RpL13-PB FBpp0099517 25.0 218 11.64 NP_001033891 ABC65888
Additional Polypeptide Data & Comments
Reported size (kD)	218 (aa) (Helps et al., 1995)
Comments
External Data
Linkouts	PANTHER - Protein classification by function, families, and pathways • FBgn0011272
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein L13e (IPR001380)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA263565 AA263863 AA264329 AA433209 AA440570 AA440786 AA441007 AA536333 AA539171 AA539388 AA540933 AA694950 AA695398 AA695852 AA695998 AA696598 AA696609 AA697142 AA801637 AA801703 AA801751 AA802040 AA802119 AA802222 AA802592 AA802731 AA803264 AA803332 AA803529 AA803544 AA803882 AA803932 AA804091 AA817376 AA820248 AA820296 AA820441 AA820556 AA820737 AA821107 AA821144 AA821185 AA821193 AA940636 AA941200 AA941258 AA941546 AA941945 AA942203 AA942248 AA949120 AA950575 AA950915 AA978491 AA979127 AA979367 AA979483 AE003626 AAF52842 AF171739 AI062354 AI062500 AI062556 AI063029 AI063315 AI064129 AI064164 AI064302 AI064428 AI064656 AI106612 AI106737 AI106989 AI107301 AI107340 AI107910 AI108274 AI109442 AI109481 AI109827 AI110210 AI134130 AI134255 AI135033 AI135371 AI135546 AI238226 AI238610 AI238955 AI257037 AI257443 AI257670 AI260067 AI260234 AI260843 AI261100 AI292778 AI292825 AI293371 AI294329 AI294864 AI295479 AI296125 AI297301 AI297380 AI386925 AI387343 AI387442 AI388765 AI388864 AI388989 AI389440 AI404711 AI405305 AI406124 AI514173 AI514976 AI517227 AI517549 AI518742 AI518811 AI519939 AI520403 AI520490 AI531918 AI531931 AI532107 AI532808 AI533090 AI533847 BF491782 BF504061 BG635887 BG635920 BG635930 BG635970 BG636178 BG636290 BG636520 BG636572 BG636845 BG636911 BG638140 BG638146 BG640507 BG640520 BG641059 BI141849 BI162173 BI162267 BI162268 BI163969 BI164017 BI164554 BI165109 BI165664 BI165719 BI166967 BI168008 BI168044 BI169093 BI170364 BI170382 BI170494 BI170664 BI170859 BI171175 BI171363 BI171857 BI171964 BI172204 BI172270 BI172287 BI172314 BI172440 BI173535 BI173576 BI212150 BI213438 BI213601 BI215201 BI215255 BI216006 BI228188 BI229657 BI229909 BI229967 BI230086 BI230090 BI230193 BI230243 BI230976 BI231142 BI231542 BI234254 BI234848 BI235617 BI236021 BI236042 BI236096 BI236269 BI236484 BI237883 BI238250 BI239252 BI239749 BI240204 BI242052 BI242442 BI351661 BI352006 BI352236 BI352248 BI352434 BI352445 BI352459 BI353030 BI353329 BI353348 BI353408 BI353436 BI353552 BI353618 BI353627 BI353746 BI353785 BI353806 BI354028 BI354096 BI354797 BI354902 BI354981 BI355096 BI355337 BI355412 BI355492 BI355592