A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\Tre

General Information
SymbolDmel\TreSpeciesD. melanogaster
NameTrehalose-sensitivityAnnotation symbolCG15779
Feature typeprotein_coding_geneFlyBase IDFBgn0003747
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)XRecombination map1-13.6
Cytogenetic map5A12-5A12Sequence locationX:5,574,760..5,576,476 [+]
Map ( GBrowse ) detailed view
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Automatically generated summary

See sections below for more information
The gene Trehalose-sensitivity is referred to in FlyBase by the symbol Tre (CG15779, FBgn0003747). It has the cytological map location 5A12. Its sequence location is X:5574760..5576476. Its molecular function is described as: taste receptor activity; G-protein coupled receptor activity. It is involved in the biological processes: sensory perception of taste; sensory perception of sweet taste; detection of chemical stimulus involved in sensory perception of taste; G-protein coupled receptor protein signaling pathway. 71 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide.

External Summaries
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Tre: Trehalose sensitivity (J.C. Hall)
Locus determining differences in sensitivity to the taste of the disaccharide trehalose in behaviorly-based (fluid intake) tests (no differences in sensitivity to glucose, fructose, or sucrose). The Tre+ allele results in high trehalose sensitivity, the Tre allele in low trehalose sensitivity. Females with half the normal dose of a given Tre+ allele are half as sensitive to trehalose, but flies (male or female) with twice the normal dose of Tre+ show only a slight increase in sensitivity as compared to normal flies. Tre is thought to be a structural gene for the trehalose specific receptor in D. melanogaster (Tanimura et al., 1988).
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
5A12-5A12  
Limits computationally determined from genome sequence between P{EP}Tre1EP496 and P{EP}cvEP1349&P{EP}CG32758EP1368  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
1-13.6
 
Left of (cM)
Right of (cM)
Notes
Closely linked to cx.
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\Tre for information on other features
detailed view FBtr0070848 FBtr0070802 FBpp0070768 FBti0071706 FBti0066765 FBti0036826 FBti0007448 FBti0030351 FBti0069245 FBti0029698 FBti0055116 FBti0028866 FBti0030212 FBti0029585 FBti0040146 FBti0055987 FBti0017150 FBti0035185 FBti0007320 FBti0037298 FBti0013457 FBti0013458 FBti0071874
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0070802
  1335
  444
Additional Transcript Data & Comments
Reported size (kB)
1.179 (longest cDNA)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Tre-PA  
FBpp0070768  
51.2  
444  
9.94  
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Trehalose receptor (IPR009318)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name