Gene Dmel\mod

General Information
Symbol	Dmel\mod	Species	D. melanogaster
Name	modulo	Annotation symbol	CG2050
Feature type	protein_coding_gene	FlyBase ID	FBgn0002780
Created / Updated	2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	100E3-100E3	Sequence location	3R:27,877,794..27,880,696 [+]
Map ( GBrowse )
Summary Information
Automatically generated summary See sections below for more information	The gene modulo is referred to in FlyBase by the symbol mod (CG2050, FBgn0002780). It has the cytological map location 100E3. Its sequence location is 3R:27877794..27880696. Its molecular function is described as: DNA binding; mRNA binding; protein binding; sequence-specific DNA binding; nucleotide binding. It is involved in the biological processes: spermatid development; cell proliferation. 19 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: anatomical structure; adult; organ system; embryonic gnathal segment; organism; embryonic segment; embryonic head; embryonic tagma; adult thorax; spiracle; peripheral nervous system; adult segment. It has one annotated transcript and one annotated polypeptide.
External Summaries

Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 100E3-100E3 Limits computationally determined from genome sequence between P{EP}pygo^EP1076 and P{PZ}ttk⁰²⁶⁶⁷&P{lacW}ttk^j6C7
Experimentally Determined Cytological Location
Cytogenetic map Notes References 100F5-100F5 (Roman, 2000.1.4) 100E1-100F5 (determined by in situ hybridisation) (Spradling et al., 1999) 100E1-100F5 (BDGP Project Members, 1994-1999) 100F-100F (determined by in situ hybridisation) (Krejci et al., 1989)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology) References In direction of increasing cytology: krz- mod+ Map205- (Roman et al., 2000) Gene Order (overall orientation not stated) References Overall orientation not stated: mod- krz+ (Roman, 2000.1.4)
Gene Model & Products
Please see the GBrowse view of Dmel\mod for information on other features
Comments on Gene Model

Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) mod-RA FBtr0085874 NM_079875 2275 542
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kD) Length (aa) Theoretical pI RefSeq ID GenBank protein mod-PA FBpp0085233 60.3 542 5.07 NP_524614 AAF57213
Additional Polypeptide Data & Comments
Reported size (kD)	78 (kD) (Garzino et al., 1992)
Comments
External Data
Linkouts	PANTHER - Protein classification by function, families, and pathways • FBgn0002780
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • RNA recognition motif, RNP-1 (IPR000504) Nucleotide-binding, alpha-beta plait (IPR012677)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201310 AA201366 AA201499 AA201728 AA201870 AA203046 AA246342 AA246444 AA246972 AA263349 AA263478 AA263595 AA263845 AA264096 AA264601 AA390424 AA390483 AA390824 AA390878 AA390911 AA391191 AA391388 AA391726 AA392056 AA392449 AA392480 AA392530 AA392641 AA392833 AA438410 AA438848 AA439283 AA439384 AA439516 AA439571 AA439985 AA440039 AA440193 AA440374 AA441290 AA441341 AA441573 AA441629 AA539050 AA539173 AA539247 AA539527 AA539541 AA540173 AA540597 AA540630 AA567196 AA694741 AA694742 AA694772 AA695017 AA695109 AA695654 AA696340 AA696594 AA696829 AA802082 AA802207 AA802250 AA803281 AA803287 AA803302 AA803629 AA816490 AA816624 AA817110 AA817116 AA820120 AA820176 AA820525 AA940595 AA940784 AA940892 AA941098 AA941143 AA941233 AA941324 AA941402 AA941475 AA941618 AA941646 AA941875 AA942173 AA942431 AA942439 AA942567 AA942628 AA949084 AA949417 AA949557 AA949631 AA949862 AA950442 AA950451 AA951248 AA951549 AA951675 AA951679 AA951682 AA951736 AA951759 AA951977 AA951991 AA952228 AA952239 AA978440 AA979560 AA990667 AE003780 AAF57213 AF185267 AAF08255 AI063276 AI107056 AI108440 AI108715 AI292745 AI295920 AI455242 AI455605 AI455617 AI455766 AI456269 AI456360 AI456740 AI456781 AI456897 AI456912 AI456995 AI457084 AI512094 AI512387 AI512480 AI514356 AI515939 AI516002 AI516249 AI516422 AI516473 AI516783 AI517274 AI517851 AI518628 AI518746 AI518922 AI519732 AI519788 AI520084 AI520569 AI531852 AI532049 AI532342 AI532626 AI534675 AI542140 AI544112 AI546397 AQ025239 AQ026436 AY058519 AAL13748 BF487261 BF490985 BF491487 BG635423 BG635701 BG637222 BG637477 BG638271 BG638375 BG638414 BG638586 BG638855 BG638896 BG640200 BG640562 BG641436 BI163015 BI163977 BI164550 BI165692 BI168277 BI169697 BI170837 BI171787 BI212516 BI215528 BI216101 BI228322 BI229787 BI230925 BI231621 BI235090 BI235735 BI237506 BI237841 BI238599 BI238899 BI239435 BI240063 BI241424 BI241502 BI242669 BI351734 BI351819 BI353097 BI353659 BI354001 BI355197 BI355923 BI356249 BI356251 BI356706 BI356859 BI358608 BI362646 BI363409 BI364454 BI365175 BI365185 BI366914 BI367132 BI367140 BI367236 BI368309 BI369175 BI369486 BI370832 BI371722