HomeGene Dmel\HLHm5
| General Information | |||
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| Symbol | Dmel\HLHm5 | Species | D. melanogaster |
| Name | E(spl) region transcript m5 | Annotation symbol | CG6096 |
| Feature type | protein_coding_gene | FlyBase ID | FBgn0002631 |
| Created / Updated | 2005-09-09/2005-09-09 | ||
| Genomic Location | |||
| Chromosome (arm) | 3R | Recombination map | 3-89.1 |
| Cytogenetic map | 96F10-96F10 | Sequence location | 3R:21,854,572..21,855,457 [-] |
| Map ( GBrowse ) | 
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Summary Information
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Automatically generated summary
See sections below for more information | The gene E(spl) region transcript m5 is referred to in FlyBase by the symbol HLHm5 (CG6096, FBgn0002631). It has the cytological map location 96F10. Its sequence location is 3R:21854572..21855457. Its molecular function is described as: DNA binding; transcription factor activity; specific transcriptional repressor activity; transcription regulator activity. It is involved in the biological processes: cell fate commitment; negative regulation of transcription; nervous system development; compound eye development; regulation of transcription, DNA-dependent. 16 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; microchaeta; eo neuron; peripheral nervous system; central nervous system. It has one annotated transcript and one annotated polypeptide. | ||
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Detailed Mapping Data
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| FlyBase Computed Cytological Location | |||
Cytogenetic map Evidence for location 96F10-96F10
Limits computationally determined from genome sequence between P{PZ}l(3)rQ197rQ197 and P{lacW}scribj7B3
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| Experimentally Determined Cytological Location | |||
Cytogenetic map Notes References 96F11-96F14 | |||
| Experimentally Determined Recombination Data | |||
| Location | 3-89.1 | ||
| Left of (cM) | |||
| Right of (cM) | |||
| Notes | |||
| Molecular Map Data | |||
Gene Order (in direction of increasing cytology)
References In direction of increasing cytology: HLHmδ+ HLHmγ- HLHmβ- mα+ m1? m2? HLHm3+ m4- HLHm5- m6+ HLHm7+ E(spl)+ gro+ In direction of increasing cytology: HLHmβ- mα+ m1+ m2- HLHm3+ m4- HLHm5- m6+ HLHm7+ Gene Order (overall orientation not stated) References Overall orientation not stated: m4- HLHm5- m6+ HLHm7+ E(spl)+ gro+ Overall orientation not stated: HLHmδ+ HLHmγ+ HLHmβ- mα+ m1+ m2- HLHm3+ m4- HLHm5- m6+ HLHm7+ E(spl)+ gro+ | |||
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Gene Model & Products
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Please see the
GBrowse view of
Dmel\HLHm5
for information on other features
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| Comments on Gene Model | |||
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Transcript Data
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| Annotated Transcripts | |||
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) | |||
| Additional Transcript Data & Comments | |||
| Reported size (kB) | 1.0 (northern blot) | ||
| Comments | |||
| External Data | |||
| Crossreferences | |||
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Polypeptide Data
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| Annotated Polypeptides | |||
Name FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
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| Additional Polypeptide Data & Comments | |||
| Reported size (kD) | 178 (aa); 19 (kD predicted) | ||
| Comments | |||
| External Data | |||
| Linkouts | PANTHER
- Protein classification by function, families, and pathways
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| Crossreferences | InterPro
domains - A database of protein families, domains, and functional sites
• Basic helix-loop-helix dimerisation region bHLH (IPR001092)
Orange (IPR003650)
Helix-loop-helix DNA-binding (IPR011598)
TRANSFAC
- Eukaryotic transcription factors, their genomic binding sites, and DNA-binding profiles
•
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Sequences Consistent with the Gene Model
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| DDBJ
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EMBL / GenBank | DNA sequence Protein sequence Name | ||