A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\l(3)93Db

General Information
SymbolDmel\l(3)93DbSpeciesD. melanogaster
Namelethal (3) 93DbAnnotation symbol
Feature typegeneFlyBase IDFBgn0002386
Created / Updated2006-08-22/2006-08-22
Genomic Location
Chromosome (arm)Recombination map3-[70]
Cytogenetic map93D2-93D7Sequence location
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Automatically generated summary

See sections below for more information
The gene lethal (3) 93Db is referred to in FlyBase by the symbol l(3)93Db (FBgn0002386). It has the cytological map location 93D2-93D7. It has not been localized to the genome sequence. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has no annotated transcripts.

hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
93D2-93D7  
Left limit from non-inclusion within Df(3R)e-H5 (FBrf0040940) Right limit from inclusion within Df(3R)e-GC9 (FBrf0040940)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
3-[70]
 
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
Crossreferences
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
      Maps to
      Does NOT map to
      Identified with
      hide Mapped Features & Mutations
      Type
      Symbol & Location
      Additional Notes
      References
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      Linkouts
      Crossreferences
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      FlyBase-Curated Data
      Transcript and
      Protein data       		Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
      hide Summary of Transcript Expression
      Stage
      Tissue/Position
      Reference
      Marker for
        Subcellular Localization
        CV Term
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        Stage
        Tissue/Position
        Reference
        Marker for
          Subcellular Localization
          CV Term
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          Linkouts
          FLIGHT - Cell culture data for RNAi and other high-throughput technologies
          •
          hide Alleles & Phenotypes
          hide Summary of Allele Phenotypes
          Lethality
          Allele
          lethal | recessive
          Phenotype manifest in
          Allele
          hide Classical Alleles ( 5 )
          For All Classical Alleles Show

          Allele of l(3)93DbClassMutagenStocksKnown lesion
          l(3)93Db10 --
          l(3)93Db20 --
          l(3)93Db30 --
          l(3)93Db40 --
          l(3)93Db50 --
          hide Alleles Carried on Transgenic Constructs ( 0 )
          For All Alleles Carried on Transgenic Constructs Show

          Allele of l(3)93DbClassMutagenStocksKnown lesion
          hide Aneuploid Aberrations
          Useful deficiency
           
          Useful duplication
           
          Disrupted in
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984, Pardue et al., 1990)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
          (Pardue et al., 1990)
          (Mohler and Pardue, 1984)
          Not disrupted in
          (Mohler and Pardue, 1984, Pardue et al., 1990)
          (Mohler and Pardue, 1984)
          (Mohler and Pardue, 1984)
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          Transgenic Constructs
          Type of construct
          Name
          Expression data
          Insertions
          Type of insertions
          Name
          Expression data
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          Please look at the allele reports for the complete phenotype data
          hide Gene Ontology: Function, Process & Cellular Component ( 0 )
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          CV term
          Evidence
          References
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          CV term
          Evidence
          References
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          CV term
          Evidence
          References
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          gene
           
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          hide Summary of Genetic Interactions
          Interacts with
          Please look at the allele data for full details of the genetic interactions
          l(3)93Db allele
          Gene
          References
          hide External Data
          Linkouts
          BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions
          •
          hide Orthologs
          Genome-wide drosophilid orthologs
          Curated drosophilid orthologs
          Linkouts
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          Produces phenotype in
          Produces NO phenotype in
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          hide Stocks Listed in FlyBase ( 0 )
          hide Genomic Clones ( 0 )
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          cDNA Clones, Fully Sequenced
          BDGP DGC clones
          Other clones
          cDNA Clones, End Sequenced (ESTs)
          BDGP DGC clones
          Other clones
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          Affy Oligo
          Linkouts
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          hide Position Effect Variegation Data
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          Source for database identity of
          Source for database merge of
          Additional comments
          hide Comments About Role
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          hide External Crossreferences & Linkouts
          Sequence Crossreferences
          Other Crossreferences
          Linkouts
          BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions
          •
          FLIGHT - Cell culture data for RNAi and other high-throughput technologies
          •
          hide Synonyms & Secondary IDs ( 4 )
          Reported As
          Symbol Synonym
          er8
          (Pardue et al., 1990, Mohler and Pardue, 1984)
          l(3)93Db
           
          l(3)er8
           
          Name Synonym
          lethal (3) 93Db
           
          Secondary FlyBase IDs
            hide References ( 3 )
            Research paper
            Mohler and Pardue, 1984, Genetics 106(2): 249--265
            Mutational analysis of the region surrounding the 93D heat shock locus of Drosophila melanogaster. [FBrf0040940]
            Review
            Pardue et al., 1990, Biol. Bull., Wood's Hole 179(1): 77--86
            Hsr-Omega, a novel gene encoded by a Drosophila heat shock puff. [FBrf0051277]
            Book
            Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
            The Genome of Drosophila melanogaster. [FBrf0066905]