A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\l(3)81Fa

General Information
SymbolDmel\l(3)81FaSpeciesD. melanogaster
Namelethal (3) 81FaAnnotation symbol
Feature typegeneFlyBase IDFBgn0002300
Created / Updated2006-08-22/2006-08-22
Genomic Location
Chromosome (arm)Recombination map3-[47.1]
Cytogenetic map81F-81FSequence location
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Automatically generated summary

See sections below for more information
The gene lethal (3) 81Fa is referred to in FlyBase by the symbol l(3)81Fa (FBgn0002300). It has the cytological map location 81F. It has not been localized to the genome sequence. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has no annotated transcripts.

hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
81F-81F  
Left limit from inclusion within Df(3L)7-93 (FBrf0048227) Right limit from inclusion within Df(3R)10-65 (FBrf0048227)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
3-[47.1]
 
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
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Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
Crossreferences
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
      Maps to
      Does NOT map to
      Identified with
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      Type
      Symbol & Location
      Additional Notes
      References
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      FlyBase-Curated Data
      Transcript and
      Protein data       		Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
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      Stage
      Tissue/Position
      Reference
      Marker for
        Subcellular Localization
        CV Term
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        Stage
        Tissue/Position
        Reference
        Marker for
          Subcellular Localization
          CV Term
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          Linkouts
          FLIGHT - Cell culture data for RNAi and other high-throughput technologies
          •
          hide Alleles & Phenotypes
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          Lethality
          Allele
          lethal
          Phenotype manifest in
          Allele
          hide Classical Alleles ( 4 )
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          Allele of l(3)81FaClassMutagenStocksKnown lesion
          l(3)81Fa10 --
          l(3)81Fa20 --
          l(3)81Fa30 --
          l(3)81Fa40 --
          hide Alleles Carried on Transgenic Constructs ( 0 )
          For All Alleles Carried on Transgenic Constructs Show

          Allele of l(3)81FaClassMutagenStocksKnown lesion
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          Disrupted in
          (Marchant and Holm, 1988)
          (Pauli et al., 1995)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
           
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          Not disrupted in
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
          (Marchant and Holm, 1988)
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          Transgenic Constructs
          Type of construct
          Name
          Expression data
          Insertions
          Type of insertions
          Name
          Expression data
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          Please look at the allele reports for the complete phenotype data
          hide Gene Ontology: Function, Process & Cellular Component ( 0 )
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          CV term
          Evidence
          References
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          CV term
          Evidence
          References
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          CV term
          Evidence
          References
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          gene
           
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          Interacts with
          Please look at the allele data for full details of the genetic interactions
          l(3)81Fa allele
          Gene
          References
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          Linkouts
          BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions
          •
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          Genome-wide drosophilid orthologs
          Curated drosophilid orthologs
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          Produces phenotype in
          Produces NO phenotype in
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          hide Genomic Clones ( 0 )
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          cDNA Clones, Fully Sequenced
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          Source for database identity of
          Source for database merge of
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          One of a series of EMS-induced lethals detected by failure to complement proximal heterochromatic deficiencies in 3L or 3R, which resulted from detachments, i.e., reconstitutions of normal third chromosomes, from irradiated C(3L)RM/C(3R)RM-bearing females; a large set of such proximal heterochromatic deficiencies was employed in deficiency mapping of these lethals (Marchant and Holm, 1988).
           
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          Sequence Crossreferences
          Other Crossreferences
          Linkouts
          BioGRID - Interaction data, including yeast 2-hybrid and genetic interactions
          •
          FLIGHT - Cell culture data for RNAi and other high-throughput technologies
          •
          hide Synonyms & Secondary IDs ( 4 )
          Reported As
          Symbol Synonym
          81Fa
          (Dimitri et al., 2003)
          l(3)81Fa
          (Dimitri et al., 2003)
          l(3)Rh1
          (Schulze et al., 2001, Marchant and Holm, 1988, )
          Name Synonym
          lethal (3) 81Fa
           
          Secondary FlyBase IDs
            hide References ( 7 )
            Research paper
            Koryakov et al., 2002, Genetics 160(2): 509--517
            Cytogenetic analysis of the third chromosome heterochromatin of Drosophila melanogaster. [FBrf0144895]
            Schulze et al., 2001, Molec. gen. Genet. 264(6): 782--789
            Essential genes in proximal 3L heterochromatin of Drosophila melanogaster. [FBrf0134775]
            Pauli et al., 1995, Genetics 139(2): 713--732
            Identification of regions interacting with ovo<up>D</up> mutations: Potential new genes involved in germline sex determination or differentiation in Drosophila melanogaster. [FBrf0080317]
            Marchant and Holm, 1988, Genetics 120: 519--532
            Genetic analysis of the heterochromatin of chromosome 3 of Drosophila melanogaster. [FBrf0048227]
            Review
            Dimitri et al., 2005, BioEssays 27(1): 29--41
            The paradox of functional heterochromatin. [FBrf0182735]
            Dimitri et al., 2003, Genetica 117(2-3): 209--215
            Vital genes in the heterochromatin of chromosomes 2 and 3 of Drosophila melanogaster. [FBrf0158962]
            Book
            Lindsley and Zimm, 1992, The Genome of Drosophila melanogaster.
            The Genome of Drosophila melanogaster. [FBrf0066905]