A Database of Drosophila Genes & Genomes

FB2008_06, released July 3, 2008
 

Gene Dmel\dsh

General Information
SymbolDmel\dshSpeciesD. melanogaster
NamedishevelledAnnotation symbolCG18361
Feature typeprotein_coding_geneFlyBase IDFBgn0000499
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)XRecombination map1-34.5
Cytogenetic map 10B4-10B5 Sequence locationX:11,249,914..11,252,759 [+]
Map ( GBrowse ) detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene dishevelled is referred to in FlyBase by the symbol dsh (CG18361, FBgn0000499). It has the cytological map location 10B4-10B5. Its sequence location is X:11249914..11252759. Its molecular function is described as: Notch binding; protein binding; signal transducer activity. It is involved in the biological processes described with 29 unique terms, many of which group under: anatomical structure development; sensory organ development; establishment of planar polarity; organ morphogenesis; cell projection organization and biogenesis; cell communication; gamete generation; regulation of developmental process; signal transduction; imaginal disc-derived wing hair organization and biogenesis; sexual reproduction; regulation of cellular component organization and biogenesis. 102 alleles are reported. The phenotypes of these alleles are annotated with 86 unique terms, many of which group under: adult segment; peripheral nervous system; organ system; nervous system; adult mesothoracic segment; abdominal ventral denticle belt; larval abdominal segment; embryonic/larval tracheal system; imaginal precursor; portion of tissue. It has 2 annotated transcripts and 2 annotated polypeptides.

External Summaries
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
dsh: dishevelled
Most alleles lethal, but dsh1, although poorly viable as homozygous females or hemizygous males, appears to be fully viable when heterozygous to a deficiency for the region, suggesting that the reduced viability is unrelated to dsh1. dsh1 flies have deranged thoracic hairs, divergent and blistered wings, and ellipsoid eyes. Leg bristles, hairs, and bracts display high frequencies of abnormal polarity; extra joints or joint primordia found frequently in the first and second tarsal joints of the first and second pairs of legs; of 270 ectopic joints, 268 displayed inverted polarity [Held, Duarte, and Derakhshanian, 1986, Wilhelm Roux's Arch. Dev. Biol. 195: 145-57 (fig.)]. Males and females fertile, males weakly so. Homozygotes and hemizygotes for the lethal alleles die as second- to early-third-instar larvae when derived from heterozygous mothers; when derived from homozygous germ-line clones, on the other hand, embryos with segment-polarity defects result; only ventral cuticle is present, covered with a lawn of setae; lack dorsal cuticle, posterior spiracles and filzkorper material. At six to seven hours maxillary and labial segments appear to be missing and parasegmental boundaries do not form; cell death apparent in vicinity of tracheal pits, which subsequently fuse; segmental boundaries fail to form; organization of central nervous system seems normal. Loss of cells of posterior segment compartments leads to discontinued production of en+ product. Viability of dsh1/dsh3, for example, when derived from homozygous dsh3 oogenic clones, is normal, indicating that dsh1 is wild type for the early function.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
10B4-10B5  
Limits computationally determined from genome sequence between P{EP}CG11756EP1610 and P{EP}CG32666EP1452  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
10B3-10B10
(determined by in situ hybridisation)  
10B3-10B10
(determined by in situ hybridisation)  
10B5-10B11
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
1-34.5
 
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
In direction of increasing cytology: dsh+ anon-10Ba- hop-
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\dsh for information on other features
detailed view FBtr0073453 FBtr0073454 FBtr0073455 FBtr0073456 FBpp0073309 FBpp0073311 FBpp0073310 FBpp0073312 FBti0013152
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0073454
  2846
  623
FBtr0073455
  2780
  601
Additional Transcript Data & Comments
Reported size (kB)
2.7 (northern blot)
2.9, 2.6 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
dsh-PA  
FBpp0073310  
68.9  
623  
6.29  
dsh-PB  
FBpp0073311  
66.4  
601  
6.42  
Additional Polypeptide Data & Comments
Reported size (kD)
623 (aa); 70 (kD observed)
623 (aa); 70 (kD predicted)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
Maps to
Does NOT map to
Identified with
hide Mapped Features & Mutations
Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
Type
Symbol & Location
Additional Notes
References
deletion
comment=A deletion of 543 bases and insertion of one base that causes a frameshift after amino acid residue 94. The resulting sequence at the junction is ggtaacaatcTacggcgg.
evidence=experimental
point mutation
comment=Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
evidence=experimental
na_change=G11251624A
pr_change=R413H|dsh-PA,R391H|dsh-PB
reported_pr_change=R413H
point mutation
comment=Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
evidence=experimental
na_change=A11251636T
pr_change=K417M|dsh-PA,K395M|dsh-PB
reported_pr_change=K417M
point mutation
comment=Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
evidence=experimental
na_change=T11251800C
pr_change=C472R|dsh-PA,C450R|dsh-PB
reported_pr_change=C472R
rescue fragment
comment=Position of rescue fragment on reference sequence inferred by FlyBase curator.
evidence=experimental
linked_to=SalI-XbaI_rfrag
rescue fragment
comment=Position of rescue fragment on reference sequence inferred by FlyBase curator.
evidence=experimental
linked_to=SalI-SalI_rfrag
hide External Data
Linkouts
Crossreferences
hide Expression Data
FlyBase-Curated Data
Transcript and
Protein data
Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
hide Summary of Transcript Expression
Stage
Tissue/Position
Reference
 embryonic stage-adult stage
 oogenesis stage,adult stage
 egg chamber
 larval stage
 imaginal disc
 embryonic stage | stage 11
 embryonic stage | early
 embryonic stage
Marker for
    Subcellular Localization
    CV Term
    hide Summary of Polypeptide Expression
    Stage
    Tissue/Position
    Reference
    Marker for
      Subcellular Localization
      CV Term
      hide External Data & Images
      Linkouts
      FLIGHT - Cell culture data for RNAi and other high-throughput technologies
      FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
      GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies
      hide Alleles & Phenotypes
      hide Summary of Allele Phenotypes
      Lethality
      Allele
      Other Phenotypes
      Allele
      Sterility
      Allele
      Phenotype manifest in
      Allele
      leg & joint
      mesothoracic tergum & trichome
      adult thorax & microchaeta
      axon & dorsal cluster neuron
      macrochaeta & wing
      wing & macrochaeta