A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Aberration Dmel\Df(1)JC70

General Information
SymbolDmel\Df(1)JC70SpeciesD. melanogaster
NameFlyBase IDFBab0000474
Feature typechromosomal_deletionCreated / Updated2006-08-22/2006-08-22
Formalized genetic data rap << bk1 << l(1)4Da << bk2 << cx
Sequence coordinates
Deleted segment4C11--5A4
Duplicated segment
Computed Breakpoints include 4C11-4C12;5A3-5A4
Breakpoints Inherited  
hide Nature of the Aberration
Cytological Order
Progenitor
Mutagen
X ray
(Eeken and Sobels, 1990)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Salz, 1992, Duffy et al., 1996, Cook et al., 1997, Harbecke and Lengyel, 1995, Han et al., 1997, Eeken and Sobels, 1990, Craymer and Roy, 1980)
Breakpoints
4C15-4C16;5A1-5A2
(Craymer and Roy, 1980, Eeken and Sobels, 1990, Harbecke and Lengyel, 1995, Duffy et al., 1996, Cook et al., 1997)
4C11-4C12;5A3-5A4
(Salz, 1992)
4C5-4C6;5A1-5A2
(Han et al., 1997)
Causes alleles
Carries alleles
Transposon Insertions
Genetic mapping information
Comments
hide Comments on Cytology
All limits from polytene analysis (FBrf0056236)
 
Deletion of 22/28 bands.
(Eeken and Sobels, 1990)
hide Molecularly Mapped Breakpoints
 
hide Sequence Crossreferences
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
hide Gene Deletion & Duplication Data
hide Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
ctp
(Ghosh-Roy et al., 2004)
snf
(Oliver et al., 1988, Salz, 1992, Granadino et al., 1992)
ovo
(Oliver et al., 1988, Salz, 1992, Harbecke and Lengyel, 1995)
l(1)4Fa
(Salz, 1992)
l(1)4Da
(Schalet, 1986)
fs(1)A1059
(Oliver et al., 1988, Salz, 1992)
l(1)4Ea
(Salz, 1992)
fs(1)A456
(Oliver et al., 1988, Salz, 1992)
mus108
(Laurencon, 2001.7.21)
rg
(Craymer and Roy, 1980, Oliver et al., 1988, Salz, 1992, Han et al., 1997)
Molecular Data
hide Genes NOT Deleted / Disrupted
Complementation Data
brn
(Oliver et al., 1988)
mei-9
(Oliver et al., 1988)
bi
(Schalet, 1986, Oliver et al., 1988)
rb
(Craymer and Roy, 1980, Schalet, 1986, Oliver et al., 1988)
cv
(Schalet, 1986, Oliver et al., 1988)
rux
(Schalet, 1986)
peb
(Schalet, 1986, Tearle and Nusslein-Volhard, 1987, Oliver et al., 1988)
norpA
(Oliver et al., 1988)
ec
(Schalet, 1986, Oliver et al., 1988)
lac
(Oliver et al., 1988)
l(1)4ACa
(Schalet, 1986)
l(1)5Aa
(Schalet, 1986)
l(1)5AEa
(Schalet, 1986)
cho
(Schalet, 1986, Oliver et al., 1988)
l(1)5ACb
(Schalet, 1986)
l(1)5Da
(Schalet, 1986)
l(1)5ACa
(Schalet, 1986)
fs(1)se
(Perez-Chiesa et al., 1983)
l(1)5DEa
(Schalet, 1986)
l(1)4Ca
(Schalet, 1986)
cx
(Craymer and Roy, 1980, Schalet, 1986)
qed
(Florence, 1999.7.22)
amb
(Oliver et al., 1988)
Molecular Data
rap
(Sigrist and Lehner, 1997)
hide Genes Duplicated
Complementation Data
Molecular Data
hide Genes NOT Duplicated
Complementation Data
Molecular Data
hide Related Comments
hide Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.
(Coyne et al., 1998)
Dominantly causes tergite defects in less than 50% of run3 heterozygotes.
(Duffy et al., 1996)
Hemizygous embryos were examined with polarised light microscopy and antibody staining and found to have wild type muscle pattern and contraction.
(Drysdale et al., 1993)
Heterozygous females exhibit reduced viability and fertility.
(Eeken and Sobels, 1990)
Intermediate second site non-complementing phenotype with zipEbr and zipmhc-c6.1: malformed phenotype penetrance 25-75%.
(Halsell and Kiehart, 1998)
Midgut development of mutant embryos is wild type.
(Bilder and Scott, 1995)
Shows no maternal enhancement of dpphr4.
(Nicholls and Gelbart, 1998)
Uncovers Dsec\ovo in D.melanogaster/D.sechellia hybrids.
(Sucena and Stern, 2000)
hide Position Effect Variegation Data
  
hide Stocks ( 5 )
Bloomington
944
Df(1)JC70/FM7c, sn+
5279
Df(1)JC70/Dp(1;Y)dx+5, y+/C(1)M5
Kyoto
108924
Df(1)JC70/FM7c, sn+
108145
Df(1)JC70/Dp(1;Y)dx+5, y+/C(1)M5
103246
Df(1)JC70 / FM7, y31d sc8 wa snX2 vOf g4 B1
hide Notes on Origin
Discoverer
Lefevre.
 
hide Balancer / Genotype Variants of the Aberration
    hide Separable Components
      hide Other Comments
      hide Synonyms & Secondary IDs ( 3 )
      Reported As
      Symbol Synonym
      Df(1)Jc70
      (Ghosh-Roy et al., 2004)
      Df(1)JC70
      (Jordan et al., 2006, Crest et al., 2007)
      JC70
      (Sanchez et al., 1994)
      Name Synonym
      Secondary FlyBase IDs
        hide References ( 41 )
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        hide Recent research papers ( 2 )
        Crest et al., 2007, Genetics 175(2): 567--584
        Onset of the DNA replication checkpoint in the early Drosophila embryo. [FBrf0194644]
        Jordan et al., 2006, Genetics 174(1): 271--284
        Quantitative trait loci for locomotor behavior in Drosophila melanogaster. [FBrf0193517]
        Show all research papers ...